RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 FAM120BQ96EK7 910 aaKnown RBP5.54□□□□□ -1.52
COPA-206ENST00000545266 GRAMD2BQ96HH9 432 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 MEIS3Q99687 375 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 SLC28A3Q9HAS3 691 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 SMARCAL1Q9NZC9 954 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 GPR34Q9UPC5 381 aa5.54□□□□□ -1.52
COPA-206ENST00000545266 C1orf226A1L170 272 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 PRSS47A8MTI9 375 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 CLDN14O95500 239 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 ACTN1P12814 892 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 TMEM11P17152 192 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 BDKRB2P30411 391 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 PRCPP42785 496 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 CLCNKAP51800 687 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 GRSF1Q12849 480 aaKnown RBP eCLIP5.53□□□□□ -1.52
COPA-206ENST00000545266 DLG1Q12959 904 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 MYBPHQ13203 477 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 IRF3Q14653 427 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 CALCRLQ16602 461 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 CTF1Q16619 201 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 RARS2Q5T160 578 aaKnown RBP5.53□□□□□ -1.52
COPA-206ENST00000545266 BRAT1Q6PJG6 821 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 SLC36A4Q6YBV0 504 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 SRBD1Q8N5C6 995 aaKnown RBP5.53□□□□□ -1.52
COPA-206ENST00000545266 PCDH20Q8N6Y1 951 aaKnown RBP5.53□□□□□ -1.52
COPA-206ENST00000545266 OR2AK2Q8NG84 335 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 APBB2Q92870 758 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
COPA-206ENST00000545266 SEBOXQ9HB31 216 aaPredicted RBP5.53□□□□□ -1.52
COPA-206ENST00000545266 FBXL17Q9UF56 701 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 TBC1D29Q9UFV1 150 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 VPS28Q9UK41 221 aa5.53□□□□□ -1.52
COPA-206ENST00000545266 LACTBL1A8MY62 500 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 M0QZ24 198 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 AP3D1O14617 1153 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 MID1O15344 667 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 SPINT2O43291 252 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 LINC00271P0C7V0 271 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 PLA2G2AP14555 144 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 DAOP14920 347 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 UGT1A1P22309 533 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 MCM3P25205 808 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 APOBEC1P41238 236 aaKnown RBP5.52□□□□□ -1.53
COPA-206ENST00000545266 PDLIM4P50479 330 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 PEX5P50542 639 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 NLRP5P59047 1200 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ACSM2AQ08AH3 577 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ZNF805Q5CZA5 627 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 RAB41Q5JT25 222 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ACSM2BQ68CK6 577 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ZNF280DQ6N043 979 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 DUS1LQ6P1R4 473 aaKnown RBP5.52□□□□□ -1.53
COPA-206ENST00000545266 WDR73Q6P4I2 378 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 RHBDF2Q6PJF5 856 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 TANKQ92844 425 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ZNF385AQ96PM9 386 aaKnown RBP5.52□□□□□ -1.53
COPA-206ENST00000545266 NCAPGQ9BPX3 1015 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 SDF4Q9BRK5 362 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 TM6SF1Q9BZW5 370 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 TMEM30AQ9NV96 361 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 HAUS2Q9NVX0 235 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 OCIAD1Q9NX40 245 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 ZNF224Q9NZL3 707 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 OGFRQ9NZT2 677 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 FBXO2Q9UK22 296 aaPredicted RBP5.52□□□□□ -1.53
COPA-206ENST00000545266 TMEM184BQ9Y519 407 aaPredicted RBP5.52□□□□□ -1.53
COPA-206ENST00000545266 SNX9Q9Y5X1 595 aa5.52□□□□□ -1.53
COPA-206ENST00000545266 K7ENM7 598 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 ATP2A1O14983 1001 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 GFPT2O94808 682 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 HIST1H2ABP04908 130 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 ICAM1P05362 532 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 SRPRAP08240 638 aaKnown RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 T-ENOLP0DO92 83 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 HIST1H2ADP20671 130 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 PIK3CAP42336 1068 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 CAMPP49913 170 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 GALCP54803 685 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 MC1RQ01726 317 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 CUL4AQ13619 759 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 PNLIPRP3Q17RR3 467 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 DCST1Q5T197 706 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 KIAA0930Q6ICG6 404 aaPredicted RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 KRBA2Q6ZNG9 492 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 CLEC17AQ6ZS10 378 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 HIST3H2AQ7L7L0 130 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 SZRD1Q7Z422 152 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 ZKSCAN4Q969J2 545 aaPredicted RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 RTP4Q96DX8 246 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 ELMOD3Q96FG2 381 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 MED30Q96HR3 178 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 THOC3Q96J01 351 aaKnown RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 CSF3RQ99062 836 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 C1QTNF1Q9BXJ1 281 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 SIL1Q9H173 461 aa5.51□□□□□ -1.53
COPA-206ENST00000545266 DDX31Q9H8H2 851 aaKnown RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 SUCLA2Q9P2R7 463 aaPredicted RBP5.51□□□□□ -1.53
COPA-206ENST00000545266 COPG2Q9UBF2 871 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms