RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 GUSBP11Q6P575 273 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 DOK6Q6PKX4 331 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 ZNF662Q6ZS27 426 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 TMC3Q7Z5M5 1100 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SLC35F3Q8IY50 421 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 CACTIN-AS1Q8N1I8 211 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SLC25A41Q8N5S1 370 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 MAPK15Q8TD08 544 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 OXNAD1Q96HP4 312 aaPredicted RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 MRGPRX2Q96LB1 330 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 GSDMCQ9BYG8 508 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 TRABDQ9H4I3 376 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 HACD3Q9P035 362 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 SUFUQ9UMX1 484 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 CLCA2Q9UQC9 943 aa15.64■□□□□ 0.09
CCDC78-216ENST00000544996 AAR2Q9Y312 384 aaKnown RBP15.64■□□□□ 0.09
CCDC78-216ENST00000544996 INPP4BO15327 924 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 ASMTLO95671 621 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 IVLP07476 585 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 TARDBPQ13148 414 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC78-216ENST00000544996 KLF1Q13351 362 aaPredicted RBP15.63■□□□□ 0.09
CCDC78-216ENST00000544996 RPS6KA1Q15418 735 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 SLC1A5Q15758 541 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 ST3GAL2Q16842 350 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 ALS2CLQ60I27 953 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 MARCH9Q86YJ5 346 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
CCDC78-216ENST00000544996 KDF1Q8NAX2 398 aaPredicted RBP15.63■□□□□ 0.09
CCDC78-216ENST00000544996 OR6C4Q8NGE1 309 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 LRRC45Q96CN5 670 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 EID2BQ96D98 161 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 COX14Q96I36 57 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 SPATA13Q96N96 652 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 ZSCAN5AQ9BUG6 496 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 SPATA16Q9BXB7 569 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 DPEP2Q9H4A9 486 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 TMEM98Q9Y2Y6 226 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 GPSM3Q9Y4H4 160 aa15.63■□□□□ 0.09
CCDC78-216ENST00000544996 MT-CO3P00414 261 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 FUCA1P04066 466 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 FGF1P05230 155 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 HMGCLP35914 325 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 CLDN6P56747 220 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 DCDC1P59894 354 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 CCZ1BP86790 482 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 CCZ1P86791 482 aaPredicted RBP15.62■□□□□ 0.09
CCDC78-216ENST00000544996 PDPK2PQ6A1A2 396 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 ARHGEF18Q6ZSZ5 1173 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 MARK2Q7KZI7 788 aaKnown RBP15.62■□□□□ 0.09
CCDC78-216ENST00000544996 TRIM74Q86UV6 250 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 KYQ8NBH2 561 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 GPR26Q8NDV2 337 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 WDR48Q8TAF3 677 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 CCDC110Q8TBZ0 833 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 GPBAR1Q8TDU6 330 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 ZCCHC14Q8WYQ9 949 aaKnown RBP15.62■□□□□ 0.09
CCDC78-216ENST00000544996 SCARF2Q96GP6 870 aaPredicted RBP15.62■□□□□ 0.09
CCDC78-216ENST00000544996 WDR24Q96S15 920 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 VPS18Q9P253 973 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 SPO11Q9Y5K1 396 aa15.62■□□□□ 0.09
CCDC78-216ENST00000544996 TRABD2BA6NFA1 517 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 C5orf60A6NFR6 353 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 FADS2P1A8MWK0 482 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 B4DGG1 531 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 PSMB4P28070 264 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 ADCY8P40145 1251 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 CHRNA4P43681 627 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 LRP8Q14114 963 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 ZNF569Q5MCW4 686 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 MEI1Q5TIA1 1274 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 ZDHHC20Q5W0Z9 365 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 OGFOD3Q6PK18 319 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 GLT6D1Q7Z4J2 308 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 GALNT13Q8IUC8 556 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 TRAM1L1Q8N609 369 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 DCBLD1Q8N8Z6 715 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 FAM71DQ8N9W8 422 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 TRIM58Q8NG06 486 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 CCL4L1Q8NHW4 92 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 BLOC1S5Q8TDH9 187 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 DEPDC7Q96QD5 511 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 OR2M4Q96R27 311 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 CCDC3Q9BQI4 270 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 FICDQ9BVA6 458 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 FRMD8P1Q9BZ68 369 aaPredicted RBP15.61■□□□□ 0.09
CCDC78-216ENST00000544996 CCDC86Q9H6F5 360 aaKnown RBP15.61■□□□□ 0.09
CCDC78-216ENST00000544996 RMI1Q9H9A7 625 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 NFKBIL1Q9UBC1 381 aaPredicted RBP15.61■□□□□ 0.09
CCDC78-216ENST00000544996 ZNHIT2Q9UHR6 403 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 PKP3Q9Y446 797 aa15.61■□□□□ 0.09
CCDC78-216ENST00000544996 TDRD6O60522 2096 aaKnown RBP15.61■□□□□ 0.09
CCDC78-216ENST00000544996 ARID1BQ8NFD5 2236 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 AURKAO14965 403 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 SLC25A14O95258 325 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 AGTP01019 485 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 ATP1A1P05023 1023 aaKnown RBP15.6■□□□□ 0.09
CCDC78-216ENST00000544996 BPIP17213 487 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CTBSQ01459 385 aa15.6■□□□□ 0.09
CCDC78-216ENST00000544996 CAMK2BQ13554 666 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms