RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TP53INP2Q8IXH6 220 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 CCDC13Q8IYE1 715 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 TEX19Q8NA77 164 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 AHCYL2Q96HN2 611 aaKnown RBP12.75□□□□□ -0.37
USP28-212ENST00000544750 MCCC1Q96RQ3 725 aaPredicted RBP12.75□□□□□ -0.37
USP28-212ENST00000544750 SLC38A3Q99624 504 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 SARS2Q9NP81 518 aaKnown RBP12.75□□□□□ -0.37
USP28-212ENST00000544750 FAM207AQ9NSI2 230 aaPredicted RBP12.75□□□□□ -0.37
USP28-212ENST00000544750 GPATCH2LQ9NWQ4 482 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 PPIL1Q9Y3C6 166 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 PCDHGC4Q9Y5F7 938 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 PCYT1BQ9Y5K3 369 aaPredicted RBP12.75□□□□□ -0.37
USP28-212ENST00000544750 RPS6KL1Q9Y6S9 549 aa12.75□□□□□ -0.37
USP28-212ENST00000544750 LRBAP50851 2863 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 TRBV23OR9-2A0A075B6M9 112 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 A0A1W2PQ67 120 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 NPIPB15A6NHN6 443 aaPredicted RBP12.74□□□□□ -0.37
USP28-212ENST00000544750 MAP3K6O95382 1288 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 PEX11BO96011 259 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 PDGFAP04085 211 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 TPM2P07951 284 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 RNF224P0DH78 156 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 ERCC2P18074 760 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 MAN1A1P33908 653 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 RENBPP51606 427 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 POLR2FP61218 127 aaKnown RBP12.74□□□□□ -0.37
USP28-212ENST00000544750 TRAF2Q12933 501 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 LRP8Q14114 963 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 ADAMTSL4Q6UY14 1074 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 RFLNAQ6ZTI6 216 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 KDELC2Q7Z4H8 507 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 TSPAN33Q86UF1 283 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 NLRP8Q86W28 1048 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 PGBD5Q8N414 524 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 ESX1Q8N693 406 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 COX14Q96I36 57 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 MCEEQ96PE7 176 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 SP110Q9HB58 689 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 NLRC4Q9NPP4 1024 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 PRDM8Q9NQV8 689 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 AP4E1Q9UPM8 1137 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
USP28-212ENST00000544750 DOPEY1Q5JWR5 2465 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 MN1Q10571 1320 aaPredicted RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 A0A0U1RQS6 177 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 A6NCN8 305 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 POLR1CO15160 346 aaPredicted RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 CPP00450 1065 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 ANKRD34CP0C6C1 535 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 CYP2A6P11509 494 aaPredicted RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 ZNF28P17035 718 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 GNLYP22749 145 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 GPR1P46091 355 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 EPHA4P54764 986 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 HHEXQ03014 270 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 UBXN1Q04323 297 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 LBRQ14739 615 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 RFX8Q6ZV50 586 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 ASB18Q6ZVZ8 466 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 ARFGAP1Q8N6T3 406 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 GALNT11Q8NCW6 608 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 NCSTNQ92542 709 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 ZNF599Q96NL3 588 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 NUDCD1Q96RS6 583 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 PEBP4Q96S96 227 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 ABCG8Q9H221 673 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
USP28-212ENST00000544750 TLK1Q9UKI8 766 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 POLHQ9Y253 713 aa12.73□□□□□ -0.37
USP28-212ENST00000544750 DFFAO00273 331 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 DNAJC6O75061 913 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 AGFG2O95081 481 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 C9P02748 559 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 DLSTP36957 453 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 DNAJC24Q6P3W2 148 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 IYDQ6PHW0 289 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
USP28-212ENST00000544750 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
USP28-212ENST00000544750 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms