RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ETV3P41162 512 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 DPTQ07507 201 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 KCTD16Q68DU8 428 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 ALG1LQ6GMV1 187 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 HSD11B1LQ7Z5J1 315 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 Q8N9G6 341 aaPredicted RBP16.16■□□□□ 0.18
DDX55-212ENST00000544738 FAM46DQ8NEK8 389 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 PIH1D2Q8WWB5 315 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 FAF2Q96CS3 445 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 PACSIN1Q9BY11 444 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 TMEM168Q9H0V1 697 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 LRRN3Q9H3W5 708 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 MRPL40Q9NQ50 206 aaKnown RBP16.16■□□□□ 0.18
DDX55-212ENST00000544738 RBM22Q9NW64 420 aaKnown RBP eCLIP16.16■□□□□ 0.183e-13■■■■■ 30.2
DDX55-212ENST00000544738 ANAPC2Q9UJX6 822 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 DNPEPQ9ULA0 475 aa16.16■□□□□ 0.18
DDX55-212ENST00000544738 UNC13CQ8NB66 2214 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 ABCA12Q86UK0 2595 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 FZD6O60353 706 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 ANKRD17O75179 2603 aaKnown RBP16.15■□□□□ 0.18
DDX55-212ENST00000544738 PDHA1P08559 390 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 CCNB1P14635 433 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 PNLIPP16233 465 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 GLB1P16278 677 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 ZNF30P17039 623 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 CCKBRP32239 447 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 ARHGAP25P42331 645 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 EPHB1P54762 984 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 TAS2R40P59535 323 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 PEX6Q13608 980 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 Q6ZVL8 140 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 HEATR4Q86WZ0 1026 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 DTX1Q86Y01 620 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 PELI3Q8N2H9 469 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 KIAA1524Q8TCG1 905 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 CCDC42Q96M95 316 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
DDX55-212ENST00000544738 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 SLC12A9Q9BXP2 914 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 TSPY26PQ9H489 355 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 DPEP2Q9H4A9 486 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 PLEKHB1Q9UF11 243 aaPredicted RBP16.15■□□□□ 0.18
DDX55-212ENST00000544738 APPL1Q9UKG1 709 aa16.15■□□□□ 0.18
DDX55-212ENST00000544738 RP1L1Q8IWN7 2480 aaPredicted RBP16.14■□□□□ 0.18
DDX55-212ENST00000544738 A0A0J9YYE9 177 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 C9orf172C9J069 976 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 NUDT21O43809 227 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 TRBC1P01850 177 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CEACAM5P06731 702 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 PYGLP06737 847 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CTPS1P17812 591 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 KDELR1P24390 212 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CCR10P46092 362 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 RPL26P61254 145 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 CDK3Q00526 305 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 ILF3Q12906 894 aaKnown RBP eCLIP16.14■□□□□ 0.176e-7■□□□□ 8.1
DDX55-212ENST00000544738 MESDQ14696 234 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 C14orf28Q4W4Y0 310 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CERCAMQ5T4B2 595 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 RAET1GQ6H3X3 334 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 TECPR1Q7Z6L1 1165 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 TSPAN33Q86UF1 283 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 NLRP8Q86W28 1048 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 VSIG1Q86XK7 387 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CPNE8Q86YQ8 564 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 VSTM4Q8IW00 320 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 RHOT2Q8IXI1 618 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 RAVER1Q8IY67 606 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CCNYQ8ND76 341 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 SLC35G2Q8TBE7 412 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 GPBAR1Q8TDU6 330 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 HDAC11Q96DB2 347 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 RNF157Q96PX1 679 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CMKLR1Q99788 373 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 GSDMCQ9BYG8 508 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 ABHD10Q9NUJ1 306 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 RPL26L1Q9UNX3 145 aaKnown RBP16.14■□□□□ 0.17
DDX55-212ENST00000544738 TTLL3Q9Y4R7 772 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 CACNA1DQ01668 2161 aa16.14■□□□□ 0.17
DDX55-212ENST00000544738 GOLGA6CA6NDK9 693 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 GOLGA6BA6NDN3 693 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 GOLGA6DP0CG33 693 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 GPR1P46091 355 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 DSC2Q02487 901 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 GBE1Q04446 702 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 LRRC66Q68CR7 880 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 ZNF765Q7L2R6 523 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 CCNJLQ8IV13 435 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 AP2M1Q96CW1 435 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
DDX55-212ENST00000544738 FRMD8Q9BZ67 464 aaPredicted RBP16.13■□□□□ 0.17
DDX55-212ENST00000544738 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
DDX55-212ENST00000544738 GOLGA6AQ9NYA3 693 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 DTLQ9NZJ0 730 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms