RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RGPD8O14715 1765 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-207ENST00000544052 NAIPQ13075 1403 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ASXL1Q8IXJ9 1541 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CHL1O00533 1208 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ADAMDEC1O15204 470 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CHRNB2P17787 502 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 PON1P27169 355 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 PIGAP37287 484 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 COMPP49747 757 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 SUOXP51687 545 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ACSM2AQ08AH3 577 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 AIMP1Q12904 312 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 NTRK2Q16620 822 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ACSM2BQ68CK6 577 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 HEPHL1Q6MZM0 1159 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 SGCDQ92629 289 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 SLITRK1Q96PX8 696 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 HRH4Q9H3N8 390 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CCDC177Q9NQR7 707 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 GIMAP4Q9NUV9 329 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 SEC63Q9UGP8 760 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MAU2Q9Y6X3 613 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 A0A1W2PR77 199 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 A0A1W2PRQ8 180 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM202A6NGA9 273 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CCER2I3L3R5 266 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 VCYO14598 125 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MMP2P08253 660 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MMP3P08254 477 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CYC1P08574 325 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM11P17152 192 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CERS1P27544 350 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 THPOP40225 353 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MTX1Q13505 466 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 DLG2Q15700 870 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ALDH1L2Q3SY69 923 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 Q4G0T1 1027 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 FAM47EQ6ZV65 393 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 TRILQ7L0X0 811 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 LINGO2Q7L985 606 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 PTF1AQ7RTS3 328 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CAMK1DQ8IU85 385 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 TEX45Q8NA69 505 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 AVL9Q8NBF6 648 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ARRDC2Q8TBH0 407 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 PRPF31Q8WWY3 499 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CNDP2Q96KP4 475 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ZNF570Q96NI8 536 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MKKSQ9NPJ1 570 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MRGBPQ9NV56 204 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CPSF2Q9P2I0 782 aaKnown RBP3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MORF4L1Q9UBU8 362 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 PCDHA12Q9UN75 941 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 ERVK-11Q9UQG0 969 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 CMAHPQ9Y471 501 aa3.79□□□□□ -1.8
SCFD1-207ENST00000544052 MARF1Q9Y4F3 1742 aaKnown RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 E5RJQ4 531 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 MASP2O00187 686 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 ATP2A1O14983 1001 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 PAPSS1O43252 624 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 RBMXL2O75526 392 aaKnown RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 MYZAPP0CAP1 466 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 G6PDP11413 515 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 MMP9P14780 707 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 ACADLP28330 430 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 HOXA13P31271 388 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 MRPS5P82675 430 aaKnown RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 NHLH1Q02575 133 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 TNFAIP1Q13829 316 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 INPP5JQ15735 1006 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 IGSF11Q5DX21 431 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 C1orf141Q5JVX7 400 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 SLC16A12Q6ZSM3 486 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 PLPPR4Q7Z2D5 763 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 WDR63Q8IWG1 891 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 APPL2Q8NEU8 664 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 OR8K5Q8NH50 307 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 RRNAD1Q96FB5 475 aaKnown RBP3.78□□□□□ -1.8
SCFD1-207ENST00000544052 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 KCNN2Q9H2S1 579 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.78□□□□□ -1.84e-7■■■■■ 32.6
SCFD1-207ENST00000544052 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 PAG1Q9NWQ8 432 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 ARHGEF38Q9NXL2 777 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 FLRT1Q9NZU1 646 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 STON1Q9Y6Q2 735 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 KNDC1Q76NI1 1749 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 NUP155O75694 1391 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 METP08581 1390 aa3.78□□□□□ -1.8
SCFD1-207ENST00000544052 TMEM272A0A1B0GTI8 110 aa3.77□□□□□ -1.81
SCFD1-207ENST00000544052 hCG_1809904A0A1W2PP81 198 aa3.77□□□□□ -1.81
SCFD1-207ENST00000544052 A0A1W2PPE2 198 aa3.77□□□□□ -1.81
SCFD1-207ENST00000544052 A0A1W2PR64 198 aa3.77□□□□□ -1.81
SCFD1-207ENST00000544052 GLOD5A6NK44 160 aa3.77□□□□□ -1.81
SCFD1-207ENST00000544052 AKR1B15C9JRZ8 316 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-207ENST00000544052 H7C0S8 307 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms