RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 WRBO00258 174 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 TPST2O60704 377 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 EDF1O60869 148 aaKnown RBP15.41■□□□□ 0.06
CHD4-210ENST00000544040 CHRM5P08912 532 aaPredicted RBP15.41■□□□□ 0.06
CHD4-210ENST00000544040 IFI30P13284 250 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 CDH5P33151 784 aaPredicted RBP15.41■□□□□ 0.06
CHD4-210ENST00000544040 POLR2JP52435 117 aaKnown RBP15.41■□□□□ 0.06
CHD4-210ENST00000544040 HECTD3Q5T447 861 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 C9orf64Q5T6V5 341 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 ANKS1BQ7Z6G8 1248 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 OXCT2Q9BYC2 517 aaPredicted RBP15.41■□□□□ 0.06
CHD4-210ENST00000544040 NCANO14594 1321 aa15.41■□□□□ 0.06
CHD4-210ENST00000544040 CROCC2H7BZ55 1655 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FMO1Q01740 532 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 BRINP2Q9C0B6 783 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FKBP14Q9NWM8 211 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 KLF15Q9UIH9 416 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 TIMM22Q9Y584 194 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 IQCF5A8MTL0 148 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FABP3P05413 133 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FUT4P22083 530 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 AP2S1P53680 142 aaPredicted RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 THAP5Q7Z6K1 395 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 KIAA0319LQ8IZA0 1049 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 NAT14Q8WUY8 206 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 PRRG4Q9BZD6 226 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 PRDM4Q9UKN5 801 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 A0A1W2PQ72 361 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FAM86C2PA6NEL3 165 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 MID1O15344 667 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 SERPINA13PQ6UXR4 307 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 CADM2Q8N3J6 435 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 MRPL45Q9BRJ2 306 aaKnown RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 GBA2Q9HCG7 927 aaPredicted RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 NECTIN3Q9NQS3 549 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 TOR1BO14657 336 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 SLC25A14O95258 325 aaPredicted RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 BPGMP07738 259 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 CSH1P0DML2 217 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 CSH2P0DML3 217 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 POU2F1P14859 743 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 LPOP22079 712 aaPredicted RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 OLR1P78380 273 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 PIGZQ86VD9 579 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 FAM13CQ8NE31 585 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 APOLD1Q96LR9 279 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 ACSS3Q9H6R3 686 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 SEC14L3Q9UDX4 400 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 ASTN1O14525 1302 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 BTN3A2P78410 334 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 E2F2Q14209 437 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 CWF19L1Q69YN2 538 aaKnown RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 REP15Q6BDI9 236 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 TMPRSS11BQ86T26 416 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 SATL1Q86VE3 508 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 OR2T34Q8NGX1 318 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 NXNL1Q96CM4 212 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 NMUR2Q9GZQ4 415 aa15.4■□□□□ 0.06
CHD4-210ENST00000544040 ELAC1Q9H777 363 aaKnown RBP15.4■□□□□ 0.06
CHD4-210ENST00000544040 DPPA5A6NC42 116 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 PGRP06401 933 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 HDCP19113 662 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 FAM35AQ86V20 835 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 SLC39A8Q9C0K1 460 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 NEUROD4Q9HD90 331 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 FBXO5Q9UKT4 447 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 AGO1Q9UL18 857 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 TNFRSF11BO00300 401 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 HMGB3O15347 200 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 WFS1O76024 890 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 GJA8P48165 433 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 KLF10Q13118 480 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 CLEC6AQ6EIG7 209 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 CFAP52Q8N1V2 620 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 LRTOMTQ8WZ04 291 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 MGAT4AQ9UM21 535 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 VWA7Q9Y334 891 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 TRMUO75648 421 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 SLC35G4P0C7Q5 338 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 TGFB3P10600 412 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 ZNF132P52740 706 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 VBP1P61758 197 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 CDKL1Q00532 357 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 DCBLD1Q8N8Z6 715 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 XAGE5Q8WWM1 108 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 C5orf34Q96MH7 638 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 IMP3Q9NV31 184 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 PNPLA6Q8IY17 1366 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 DNASE1L1P49184 302 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 RTL4Q6ZR62 310 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 NAT16Q8N8M0 369 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 RBM15BQ8NDT2 890 aaKnown RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 HOPXQ9BPY8 73 aaPredicted RBP15.39■□□□□ 0.05
CHD4-210ENST00000544040 CST11Q9H112 138 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 MAFFQ9ULX9 164 aa15.39■□□□□ 0.05
CHD4-210ENST00000544040 GRIN3BO60391 1043 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms