RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 VAC14Q08AM6 782 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SLC10A2Q12908 348 aaPredicted RBP7.12□□□□□ -1.27
NUP43-206ENST00000543637 LRP8Q14114 963 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 PTPRRQ15256 657 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 PCSK7Q16549 785 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 LRRC38Q5VT99 294 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ALG1LQ6GMV1 187 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 USP53Q70EK8 1073 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 CHST15Q7LFX5 561 aaPredicted RBP7.12□□□□□ -1.27
NUP43-206ENST00000543637 SPRED1Q7Z699 444 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 CCDC50Q8IVM0 306 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 RCOR2Q8IZ40 523 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 PQLC3Q8N755 202 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 CCDC112Q8NEF3 446 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ARRDC2Q8TBH0 407 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SLC39A7Q92504 469 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 RAPGEF5Q92565 580 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 P3H4Q92791 437 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SCAMP4Q969E2 229 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 FAF2Q96CS3 445 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 CRELD1Q96HD1 420 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 TTC25Q96NG3 672 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 AGAP3Q96P47 875 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 OR2M4Q96R27 311 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SLC38A3Q99624 504 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SPATA16Q9BXB7 569 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 TDRD1Q9BXT4 1180 aaKnown RBP7.12□□□□□ -1.27
NUP43-206ENST00000543637 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.12□□□□□ -1.27
NUP43-206ENST00000543637 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 RMI1Q9H9A7 625 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 MAGEE1Q9HCI5 957 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ASCL3Q9NQ33 180 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 KCNK4Q9NYG8 393 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.12□□□□□ -1.271e-15■■□□□ 14.5
NUP43-206ENST00000543637 RABGEF1Q9UJ41 708 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ATXN7L1Q9ULK2 861 aaPredicted RBP7.12□□□□□ -1.27
NUP43-206ENST00000543637 NENFQ9UMX5 172 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 SLC17A4Q9Y2C5 497 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 PCDHGA7Q9Y5G6 932 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 KIF26BQ2KJY2 2108 aa7.12□□□□□ -1.27
NUP43-206ENST00000543637 ASXL3Q9C0F0 2248 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 A0A0A6YYK5 440 aaPredicted RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 A0A0U1RQS6 177 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 OR5K4A6NMS3 321 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ERVH48-1M5A8F1 160 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 AGRPO00253 132 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ATXN7O15265 892 aaPredicted RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 MTSS1O43312 755 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 B4GAT1O43505 415 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 MTA2O94776 668 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 FUCA1P04066 466 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ATP1A1P05023 1023 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 COMTP21964 271 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CSTF2P33240 577 aaKnown RBP eCLIP7.11□□□□□ -1.27
NUP43-206ENST00000543637 SPINT3P49223 89 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 STC1P52823 247 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 MAZP56270 477 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 DYNLT1P63172 113 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 GPLD1P80108 840 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 SKOR1P84550 965 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ZFP36L1Q07352 338 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 TRA2AQ13595 282 aaKnown RBP eCLIP7.11□□□□□ -1.27
NUP43-206ENST00000543637 PYCR3Q53H96 274 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 TEX44Q53QW1 395 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CCDC181Q5TID7 509 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 KAZNQ674X7 775 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 SLC9A4Q6AI14 798 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 NYAP1Q6ZVC0 841 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 PID1Q7Z2X4 250 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CLEC14AQ86T13 490 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 SLC9B2Q86UD5 537 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 NRROSQ86YC3 692 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CCDC170Q8IYT3 715 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 NAGSQ8N159 534 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 PELI3Q8N2H9 469 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 PLD5Q8N7P1 536 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 AVL9Q8NBF6 648 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 OR10G6Q8NH81 332 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 TFB1MQ8WVM0 346 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 LRRC45Q96CN5 670 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 WBP1Q96G27 269 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 SCARF2Q96GP6 870 aaPredicted RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 MS4A3Q96HJ5 214 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CALR3Q96L12 384 aaKnown RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 LYSMD1Q96S90 227 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CCNL2Q96S94 520 aaPredicted RBP7.11□□□□□ -1.27
NUP43-206ENST00000543637 VAT1Q99536 393 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 SLC25A51Q9H1U9 297 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 CPNE5Q9HCH3 593 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 VPS18Q9P253 973 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 PISDQ9UG56 409 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 LOXL2Q9Y4K0 774 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ALG6Q9Y672 507 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 ACACBO00763 2458 aa7.11□□□□□ -1.27
NUP43-206ENST00000543637 GPR89AB7ZAQ6 455 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms