RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	ZNF839	A8K0R7	811 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CLASP2	O75122	1294 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GJB3	O75712	270 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CSPG5	O95196	566 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	SIX3	O95343	332 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	MTHFD2	P13995	350 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CST5	P28325	142 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NR1H2	P55055	460 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ARPP19	P56211	112 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	FAM189B	P81408	668 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	BNIP2	Q12982	314 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GK3P	Q14409	553 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	INPP5A	Q14642	412 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NRF1	Q16656	503 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	COQ5	Q5HYK3	327 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ANKS6	Q68DC2	871 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NADSYN1	Q6IA69	706 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	AFTPH	Q6ULP2	937 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	SPATA19	Q7Z5L4	167 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	AQP12A	Q8IXF9	295 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TTC9B	Q8N6N2	239 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GOLM1	Q8NBJ4	401 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	PPWD1	Q96BP3	646 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NMD3	Q96D46	503 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	SPATA17	Q96L03	361 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TRIB3	Q96RU7	358 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TCF12	Q99081	682 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	THEG	Q9P2T0	379 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GABRQ	Q9UN88	632 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	DMTF1	Q9Y222	760 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ARHGAP10	A1A4S6	786 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	LCHN	A4D1U4	455 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	C7orf72	A4D263	438 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	LRRC14B	A6NHZ5	514 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	SYCE1L	A8MT33	242 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525		H3BMM5	538 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CLGN	O14967	610 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	VILL	O15195	856 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NDUFS3	O75489	264 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	PIRT	P0C851	137 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	IDO1	P14902	403 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ATP6V1B1	P15313	513 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	EEF1D	P29692	281 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	FMO4	P31512	558 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NME5	P56597	212 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CLC	Q05315	142 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	FOXM1	Q08050	763 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TRIM32	Q13049	653 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	LCP2	Q13094	533 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	MRPL58	Q14197	206 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GRB7	Q14451	532 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	MTX3	Q5HYI7	312 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	FAM171A1	Q5VUB5	890 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	B3GNT6	Q6ZMB0	384 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	RETREG3	Q86VR2	466 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	PHYKPL	Q8IUZ5	450 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TSPEAR	Q8WU66	669 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TUBGCP3	Q96CW5	907 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	DTNBP1	Q96EV8	351 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	MGME1	Q9BQP7	344 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	CINP	Q9BW66	212 aa	Predicted RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	GRIP2	Q9C0E4	1043 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	NOL11	Q9H8H0	719 aa	Known RBP	13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	MAP10	Q9P2G4	905 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	ABCD2	Q9UBJ2	740 aa		13.43	□□□□□ -0.26
PPME1-208	ENST00000543525	TTC3	P53804	2025 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	CCDC160	A6NGH7	325 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	PFDN6	O15212	129 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	HNRNPR	O43390	633 aa	Known RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	SOAT2	O75908	522 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	PYGL	P06737	847 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	ATXN8OS	P0DMR3	200 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	BMP2	P12643	396 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	HSD17B1	P14061	328 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	HGF	P14210	728 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	GRIA3	P42263	894 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	FLT3LG	P49771	235 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	ZNF140	P52738	457 aa	Predicted RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	GNA12	Q03113	381 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	TAF1A	Q15573	450 aa	Predicted RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	C5orf22	Q49AR2	442 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	VPS26B	Q4G0F5	336 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	PABPC1L	Q4VXU2	614 aa	Known RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	HMBOX1	Q6NT76	420 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	PPP4R4	Q6NUP7	873 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	BORA	Q6PGQ7	559 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	PAQR3	Q6TCH7	311 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	ZBTB49	Q6ZSB9	765 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	EP400NL	Q6ZTU2	488 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	ERMP1	Q7Z2K6	904 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	AMIGO2	Q86SJ2	522 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	NKAP	Q8N5F7	415 aa	Known RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	METTL25	Q8N6Q8	603 aa		13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	NSUN5	Q96P11	429 aa	Known RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	SEPT5	Q99719	369 aa	Predicted RBP	13.42	□□□□□ -0.26
PPME1-208	ENST00000543525	SLC39A3	Q9BRY0	314 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms