RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 BCAP31P51572 246 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 THOP1P52888 689 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 GBE1Q04446 702 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 FASTKD3Q14CZ7 662 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 ZDHHC20Q5W0Z9 365 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 UBE2R2Q712K3 238 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 FAR1Q8WVX9 515 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 ROPN1LQ96C74 230 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 CENPNQ96H22 339 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 TUBA8Q9NY65 449 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 WTIPA6NIX2 430 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 C1QTNF3-AMACRE9PGA6 284 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 KHDRBS3O75525 346 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 TCF4P15884 667 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 BUD31P41223 144 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 PARP15Q460N3 678 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
TNC-212ENST00000542877 N6AMT1Q9Y5N5 214 aa13.08□□□□□ -0.32
TNC-212ENST00000542877 SLC28A2O43868 658 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 PCSK2P16519 638 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 CXCR3P49682 368 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 ACAP2Q15057 778 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 REP15Q6BDI9 236 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 FAM151BQ6UXP7 276 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 SLC34A3Q8N130 599 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 AKAP7Q9P0M2 348 aaPredicted RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 ARHGEF28Q8N1W1 1705 aaKnown RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 TLR5O60602 858 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 TULP3O75386 442 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 DHFRP00374 187 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 TRBC1P01850 177 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 HKDC1Q2TB90 917 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 RFTN2Q52LD8 501 aaPredicted RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 EGFLAMQ63HQ2 1017 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 ARL10Q8N8L6 244 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PPM1MQ96MI6 270 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 CHRAC1Q9NRG0 131 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 U3KQV3 271 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 TBC1D3BA6NDS4 549 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 OR6C75A6NL08 312 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PLOD3O60568 738 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 CCNCP24863 283 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PTPN9P43378 593 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 KIR3DL1P43629 444 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 ENPEPQ07075 957 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 CASKO14936 926 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 OMPP47874 163 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 LIPEQ05469 1076 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 RGS1Q08116 209 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 IKBKEQ14164 716 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 KHDC1Q4VXA5 237 aaKnown RBP13.07□□□□□ -0.32
TNC-212ENST00000542877 PPM1JQ5JR12 505 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 BTN2A3PQ96KV6 586 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 ZNF558Q96NG5 402 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 IKZF4Q9H2S9 585 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
TNC-212ENST00000542877 ERAL1O75616 437 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 UGT2B17O75795 530 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ASMTP46597 345 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ELP6Q0PNE2 266 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 GRM3Q14832 879 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 MYO19Q96H55 970 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 TMEM39AQ9NV64 488 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 PHF11Q9UIL8 331 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 MST1RQ04912 1400 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CLDN11O75508 207 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 VPS26BQ4G0F5 336 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 PLET1Q6UQ28 207 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ZNF572Q7Z3I7 529 aaPredicted RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 AHCYL2Q96HN2 611 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 SCELO95171 688 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 FGBP02675 491 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 FABP3P05413 133 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms