RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FUCA1P04066 466 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 CD1EP15812 388 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 GTF2H1P32780 548 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 PTGER4P35408 488 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ACVRL1P37023 503 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ACADSBP45954 432 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ART1P52961 327 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 KIAA1024LP59773 190 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 GPLD1P80108 840 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 GNA12Q03113 381 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 HYAL2Q12891 473 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ADAM9Q13443 819 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 SQSTM1Q13501 440 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 RAPGEF1Q13905 1077 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 MAP7Q14244 749 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 NR1D2Q14995 579 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 SLC39A14Q15043 492 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ACOX1Q15067 660 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 STK38Q15208 465 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 UGT8Q16880 541 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 DCAF17Q5H9S7 520 aaPredicted RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 CFAP58Q5T655 872 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 LYPLAL1Q5VWZ2 237 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 FBXW10Q5XX13 1052 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ERAP2Q6P179 960 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 DENND1BQ6P3S1 775 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 FIGNL1Q6PIW4 674 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 MARK2Q7KZI7 788 aaKnown RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 NLRP8Q86W28 1048 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 KCNMB4Q86W47 210 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 C17orf82Q86X59 251 aaPredicted RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 TTC30BQ8N4P2 665 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 KIAA0895Q8NCT3 520 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 UBE2Q2Q8WVN8 375 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ANAPC16Q96DE5 110 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 MED15Q96RN5 788 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ZSWIM1Q9BR11 485 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 OSBPL1AQ9BXW6 950 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ZCCHC2Q9C0B9 1178 aaKnown RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 CUEDC2Q9H467 287 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 GSX1Q9H4S2 264 aaPredicted RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 THAP9Q9H5L6 903 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 PCDH12Q9NPG4 1184 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 LHX9Q9NQ69 397 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 GPR83Q9NYM4 423 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 DNAI1Q9UI46 699 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 HPCAL4Q9UM19 191 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 SUFUQ9UMX1 484 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 FARSAQ9Y285 508 aaKnown RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 B3GNT3Q9Y2A9 372 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.75□□□□□ -1.65
LIMS1-214ENST00000542845 PCDHGB6Q9Y5F9 930 aa4.75□□□□□ -1.65
LIMS1-214ENST00000542845 MN1Q10571 1320 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 FER1L5A0AVI2 2057 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 A0A1B0GUH1 482 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TLDC2A0PJX2 215 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 FAM170AA1A519 330 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ILVBLA1L0T0 632 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 FAM181BA6NEQ2 426 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 DRGXA6NNA5 263 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RASA4BC9J798 803 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 K7ELQ4 463 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PDE2AO00408 941 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TNFRSF10CO14798 259 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RASA4O43374 803 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 BUB1O43683 1085 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MAN1A2O60476 641 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 STX10O60499 249 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 SNX2O60749 519 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RECQL5O94762 991 aaPredicted RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TMEM63AO94886 807 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RHOBTB3O94955 611 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CD160O95971 181 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 GSRP00390 522 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MT-ND3P03897 115 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CELA3AP09093 270 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PAEPP09466 180 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ELFN1P0C7U0 828 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 TYRP1P17643 537 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CAPN3P20807 821 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PTPN4P29074 926 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ADCY8P40145 1251 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 GARSP41250 739 aaKnown RBP4.74□□□□□ -1.65
LIMS1-214ENST00000542845 GPD2P43304 727 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 GFERP55789 205 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 RHOAP61586 193 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 HHEXQ03014 270 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ART3Q13508 389 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 PEX6Q13608 980 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 IL10RAQ13651 578 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 LLGL1Q15334 1064 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 STILQ15468 1287 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 ANO6Q4KMQ2 910 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CBWD6Q4V339 395 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CBWD3Q5JTY5 395 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 MIIPQ5JXC2 388 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 CBWD5Q5RIA9 395 aa4.74□□□□□ -1.65
LIMS1-214ENST00000542845 FAM69BQ5VUD6 431 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms