RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 P4HA1P13674 534 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ETS2P15036 469 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 GM2AP17900 193 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 IFNA8P32881 189 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 MAN1A1P33908 653 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 TTKP33981 857 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 GPD2P43304 727 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 TRAPPC10P48553 1259 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SLC18A1P54219 525 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 DRG2P55039 364 aaKnown RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 GNG2P59768 71 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 TFAP4Q01664 338 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 FCHO2Q0JRZ9 810 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PRKG1Q13976 671 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 UBE4AQ14139 1066 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SQLEQ14534 574 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SHROOM1Q2M3G4 852 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 EDRF1Q3B7T1 1238 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PPP6R3Q5H9R7 873 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 MTX3Q5HYI7 312 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PCID2Q5JVF3 399 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 C6orf183Q5T699 404 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 MEX3CQ5U5Q3 659 aaKnown RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 RGS7BPQ6MZT1 257 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 C4orf22Q6V702 233 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 IDO2Q6ZQW0 420 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ADAMTSL2Q86TH1 951 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 LRRC71Q8N4P6 559 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 CHCHD4Q8N4Q1 142 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 CCDC89Q8N998 374 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 CATSPER1Q8NEC5 780 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 OR6Y1Q8NGX8 325 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 GSDMBQ8TAX9 411 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ACTRT1Q8TDG2 376 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 HCAR2Q8TDS4 363 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ATG4AQ8WYN0 398 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 NMD3Q96D46 503 aaKnown RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 CDHR1Q96JP9 859 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF641Q96N77 438 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 INPP4AQ96PE3 977 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 FNBP1Q96RU3 617 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 YME1L1Q96TA2 773 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SELENOSQ9BQE4 189 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 HERC2P3Q9BVR0 1158 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 RNF26Q9BY78 433 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 EDEM3Q9BZQ6 932 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 B3GNT4Q9C0J1 378 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PABPC3Q9H361 631 aaKnown RBP5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SMARCAD1Q9H4L7 1026 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PSTPIP2Q9H939 334 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 TCF7L1Q9HCS4 588 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 VPS45Q9NRW7 570 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 KCNN3Q9UGI6 736 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 FBXL5Q9UKA1 691 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 CDH7Q9ULB5 785 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 VANGL2Q9ULK5 521 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ANKRD6Q9Y2G4 727 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 MAST2Q6P0Q8 1798 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 ABCB11O95342 1321 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 DUOX1Q9NRD9 1551 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 SCN4AP35499 1836 aa5.92□□□□□ -1.46
XRCC4-206ENST00000542685 RNF103O00237 685 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 RASGRF2O14827 1237 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 GPAA1O43292 621 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ZBTB43O43298 467 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 DENRO43583 198 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 SCO2O43819 266 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 GPC4O75487 556 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 GMNNO75496 209 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CIB2O75838 187 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CYP1A2P05177 515 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 FYNP06241 537 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 PRR35P0CG20 571 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ENGP17813 658 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CFL1P23528 166 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 MPGP29372 298 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ADD2P35612 726 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 PRCPP42785 496 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ALDH18A1P54886 795 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 RUNX1T1Q06455 604 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 CDC16Q13042 620 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 APOFQ13790 326 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 ZNF267Q14586 743 aaPredicted RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 KLHL38Q2WGJ6 581 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 C4orf46Q504U0 113 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 IFIT1BQ5T764 474 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 SLC9C2Q5TAH2 1124 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 DCLRE1AQ6PJP8 1040 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 IZUMO2Q6UXV1 221 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 NAPRTQ6XQN6 538 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 KIF6Q6ZMV9 814 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 RBM44Q6ZP01 1051 aaKnown RBP5.91□□□□□ -1.46
XRCC4-206ENST00000542685 MAEAQ7L5Y9 396 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 C1QL2Q7Z5L3 287 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 PAF1Q8N7H5 531 aa5.91□□□□□ -1.46
XRCC4-206ENST00000542685 USP38Q8NB14 1042 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms