RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 GLMNQ92990 594 aa15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 CDH19Q9H159 772 aa15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 TRNAU1APQ9NX07 287 aaKnown RBP15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 RSPH14Q9UHP6 348 aa15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 SHOC2Q9UQ13 582 aa15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 COL27A1Q8IZC6 1860 aaPredicted RBP15.37■□□□□ 0.05
ECHDC2-223ENST00000542552 RP1P56715 2156 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 DSPP15924 2871 aaKnown RBP15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ARHGEF17Q96PE2 2063 aaPredicted RBP15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 CELSR3Q9NYQ7 3312 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ZFHX4Q86UP3 3567 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 TCRBV7S2A1N4TA0A589 114 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 FAM149AA5PLN7 773 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 TMEM8BA6NDV4 472 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 FADS2P1A8MWK0 482 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 KCNN4O15554 427 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 OPA1O60313 960 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ZNF189O75820 626 aaPredicted RBP15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 RPIAP49247 311 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 DCDC1P59894 354 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 TCEA2Q15560 299 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 HES3Q5TGS1 186 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 CDCP2Q5VXM1 449 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ITPRIPL1Q6GPH6 555 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 NRROSQ86YC3 692 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 KLHDC8BQ8IXV7 354 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ARL10Q8N8L6 244 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 DCBLD1Q8N8Z6 715 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 GPR26Q8NDV2 337 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 GPR156Q8NFN8 814 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 CCL4L1Q8NHW4 92 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 SLC35B2Q8TB61 432 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 SPATA13Q96N96 652 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 FERMT1Q9BQL6 677 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 TRABDQ9H4I3 376 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 CARS2Q9HA77 564 aaKnown RBP15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 SUFUQ9UMX1 484 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 GPR34Q9UPC5 381 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 DOLKQ9UPQ8 538 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 R3HDM2Q9Y2K5 976 aaKnown RBP15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 ST14Q9Y5Y6 855 aa15.36■□□□□ 0.05
ECHDC2-223ENST00000542552 CPED1A4D0V7 1026 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 GOLGA6L9A6NEM1 432 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 C5orf60A6NFR6 353 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 AURKAO14965 403 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 ANXA9O76027 345 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 JUPP14923 745 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 HLA-DPA1P20036 260 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 ADRA1AP35348 466 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 CHRNA4P43681 627 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 EFL1Q7Z2Z2 1120 aaKnown RBP15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 TAF8Q7Z7C8 310 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 TRIM74Q86UV6 250 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 TTC30BQ8N4P2 665 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 KYQ8NBH2 561 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 IPMKQ8NFU5 416 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 GPR63Q9BZJ6 419 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 LZTFL1Q9NQ48 299 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 RAD18Q9NS91 495 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 VPS18Q9P253 973 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 MOSPD1Q9UJG1 213 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 PADI4Q9UM07 663 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 TMEM98Q9Y2Y6 226 aa15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 OAS3Q9Y6K5 1087 aaKnown RBP15.35■□□□□ 0.05
ECHDC2-223ENST00000542552 INPP4BO15327 924 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 STK10O94804 968 aaKnown RBP15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 AGTP01019 485 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 FGF1P05230 155 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 BPIP17213 487 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 PSMB4P28070 264 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 HMGCLP35914 325 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 ADCY8P40145 1251 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 GNPDA1P46926 289 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 GEMP55040 296 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 TARDBPQ13148 414 aaKnown RBP eCLIP15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 PYCR3Q53H96 274 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 PERM1Q5SV97 790 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 RANBP10Q6VN20 620 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 C17orf82Q86X59 251 aaPredicted RBP15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 SLC25A41Q8N5S1 370 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 FAM46DQ8NEK8 389 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 NAT6Q93015 286 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 ZSCAN5AQ9BUG6 496 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 HACD3Q9P035 362 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 CLCA2Q9UQC9 943 aa15.34■□□□□ 0.05
ECHDC2-223ENST00000542552 ZFC3H1O60293 1989 aaKnown RBP15.33■□□□□ 0.05
ECHDC2-223ENST00000542552 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 TRABD2BA6NFA1 517 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 NOBOXO60393 691 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 DNAJC6O75061 913 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms