RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM233B4DJY2 109 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 RNASET2O00584 256 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MBD3O95983 291 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 DCNP07585 359 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MBL2P11226 248 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 RALAP11233 206 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 VDRP11473 427 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CCDC130P13994 396 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CD19P15391 556 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 TPH1P17752 444 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 IL1R2P27930 398 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MTIF2P46199 727 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 RPS9P46781 194 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 SELENOPP49908 381 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 TUBP50607 506 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 SLC7A9P82251 487 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 LRMPQ12912 555 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 TRIM14Q14142 442 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ARHGEF7Q14155 803 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ICAM4Q14773 271 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MTF1Q14872 753 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 PLA1AQ53H76 456 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 SNX30Q5VWJ9 437 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ARHGAP17Q68EM7 881 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ARMC6Q6NXE6 501 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF585AQ6P3V2 769 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 SASS6Q6UVJ0 657 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 PAQR9Q6ZVX9 377 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ENOSF1Q7L5Y1 443 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 PPP1R32Q7Z5V6 425 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 C1orf210Q8IVY1 113 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ARHGAP18Q8N392 663 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 C12orf29Q8N999 325 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ANKRD52Q8NB46 1076 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 OSCP1Q8WVF1 389 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 USP13Q92995 863 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ATP2A3Q93084 1043 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 JAKMIP2Q96AA8 810 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 LRRC46Q96FV0 321 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CYP2S1Q96SQ9 504 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CDK5RAP1Q96SZ6 601 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ZSWIM1Q9BR11 485 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 HERPUD2Q9BSE4 406 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 THAP9Q9H5L6 903 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 LMAN1LQ9HAT1 526 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 GRPEL1Q9HAV7 217 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 FAM49BQ9NUQ9 324 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 IL37Q9NZH6 218 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 GCNT4Q9P109 453 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 TBC1D14Q9P2M4 693 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CHORDC1Q9UHD1 332 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 RAPGEFL1Q9UHV5 662 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 CNOT11Q9UKZ1 510 aaKnown RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 ARHGAP26Q9UNA1 814 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 PIAS3Q9Y6X2 628 aa5.58□□□□□ -1.52
CPSF7-220ENST00000541963 NUP210Q8TEM1 1887 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-220ENST00000541963 MYH10P35580 1976 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 DENND4CQ5VZ89 1909 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 FAM92AA1XBS5 289 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 SPECC1L-ADORA2AF8WAN1 911 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RAB27BO00194 218 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF185O15231 689 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 FFAR2O15552 330 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 MED7O43513 233 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 TRIAP1O43715 76 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ATG13O75143 517 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 LETM1O95202 739 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PRAMEF12O95522 483 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 NFATC1O95644 943 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PAEPP09466 180 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CHRM3P20309 590 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 HOXA5P20719 270 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 DRD1P21728 446 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CD72P21854 359 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ACRV1P26436 265 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ACVR2AP27037 513 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ATP5C1P36542 298 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 HSPA7P48741 367 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PXNP49023 591 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ANXA11P50995 505 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CACNA2D1P54289 1103 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 BCAT1P54687 386 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RAD23BP54727 409 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 MFAP3P55082 362 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RPS7P62081 194 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 NHLH1Q02575 133 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 GCNT1Q02742 428 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 GRSF1Q12849 480 aaKnown RBP eCLIP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ANGPT1Q15389 498 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CCDC142Q17RM4 750 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PDCD4Q53EL6 469 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RABL3Q5HYI8 236 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 SFRP4Q6FHJ7 346 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM270Q6UE05 265 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 GBP6Q6ZN66 633 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms