RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 C22orf39Q6P5X5 142 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ZC3H18Q86VM9 953 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 VPS36Q86VN1 386 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NLGN4XQ8N0W4 816 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 PCDH20Q8N6Y1 951 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF655Q8N720 491 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 DCAF4L2Q8NA75 395 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 AGBL5Q8NDL9 886 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NLGN4YQ8NFZ3 816 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ATL2Q8NHH9 583 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ENOX1Q8TC92 643 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CLEC4CQ8WTT0 213 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 STARD8Q92502 1023 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SEMA4DQ92854 862 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ART4Q93070 314 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 PPP1R14AQ96A00 147 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TSACCQ96A04 125 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 DHX58Q96C10 678 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGEF26Q96DR7 871 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 EEF2KMTQ96G04 330 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TMX3Q96JJ7 454 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 RPRD1AQ96P16 312 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TEFMQ96QE5 360 aaKnown RBP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 RBM15Q96T37 977 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNHG1-214ENST00000540865 PSMB7Q99436 277 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 HEPHQ9BQS7 1158 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 ZPBPQ9BS86 351 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 MIS12Q9H081 205 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 CASS4Q9NQ75 786 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 RAB20Q9NX57 234 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 SLC39A1Q9NY26 324 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 LRIT1Q9P2V4 623 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 VPS51Q9UID3 782 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TCFL5Q9UL49 500 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 TRAF3IP3Q9Y228 551 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 B3GALT1Q9Y5Z6 326 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 MED13Q9UHV7 2174 aa4.64□□□□□ -1.67
SNHG1-214ENST00000540865 NAV3Q8IVL0 2385 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 HIVEP3Q5T1R4 2406 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 IGHV5-10-1A0A0J9YXX1 117 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CXorf51AA0A1B0GTR3 108 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 ANKRD34BA5PLL1 514 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 C16orf96A6NNT2 1141 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 HNRNPRO43390 633 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TBX1O43435 398 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SUSD5O60279 629 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 STX10O60499 249 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SNAP91O60641 907 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF821O75541 412 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RFPL1O75677 317 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TM7SF2O76062 418 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TRUB2O95900 331 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TNFP01375 233 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RHOCP08134 193 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 PAEPP09466 180 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 PDCP20941 246 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RPL10P27635 214 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CCR1P32246 355 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CSTF2P33240 577 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 MAN1A1P33908 653 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 PSMC2P35998 433 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 ACADSBP45954 432 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 GPR3P46089 330 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 MXI1P50539 228 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 LIMK2P53671 638 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SRP54P61011 504 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TEKQ02763 1124 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CEBPZQ03701 1054 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 STK4Q13043 487 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SQSTM1Q13501 440 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CUL2Q13617 745 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 NFATC4Q14934 902 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 NR1D2Q14995 579 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 EIF2S3LQ2VIR3 472 aaKnown RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF805Q5CZA5 627 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 CARD16Q5EG05 197 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SYPL2Q5VXT5 272 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RETSATQ6NUM9 610 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 ENPP7Q6UWV6 458 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RD3Q7Z3Z2 195 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SETD3Q86TU7 594 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 FAM186BQ8IYM0 893 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 TP53I13Q8NBR0 393 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-214ENST00000540865 KIAA0895Q8NCT3 520 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 LRRN4CLQ8ND94 238 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RCBTB1Q8NDN9 531 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 FBXL13Q8NEE6 735 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 FAM46DQ8NEK8 389 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 OR4D9Q8NGE8 314 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 FAM149B1Q96BN6 582 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RTP4Q96DX8 246 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 DPYSL5Q9BPU6 564 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 NUDT22Q9BRQ3 303 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 SLC29A3Q9BZD2 475 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 BLZF1Q9H2G9 400 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 MMRN2Q9H8L6 949 aa4.63□□□□□ -1.67
SNHG1-214ENST00000540865 RDH14Q9HBH5 336 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms