RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ELP6Q0PNE2 266 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PCSK7Q16549 785 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ZNF284Q2VY69 593 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 KBTBD12Q3ZCT8 623 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TMEM52BQ4KMG9 183 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ANKRD20A4Q4UJ75 823 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PPM1JQ5JR12 505 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PCID2Q5JVF3 399 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 SIRPB2Q5JXA9 342 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 WDR45BQ5MNZ6 344 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ARMC12Q5T9G4 340 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 KCTD16Q68DU8 428 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 KIAA1161Q6NSJ0 714 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TRMT10BQ6PF06 316 aaKnown RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TTC7BQ86TV6 843 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 HORMAD1Q86X24 394 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 SYT12Q8IV01 421 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 DCAKDQ8WVC6 231 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PIH1D2Q8WWB5 315 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ASB12Q8WXK4 309 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 MCCC1Q96RQ3 725 aaPredicted RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 RANBP9Q96S59 729 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PAFAH2Q99487 392 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PCDH12Q9NPG4 1184 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 VPS18Q9P253 973 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PHTF1Q9UMS5 762 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ZFR2Q9UPR6 939 aaKnown RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 TCAF1Q9Y4C2 921 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PCDHB9Q9Y5E1 797 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TMEM131Q92545 1883 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3DA0A087WVF3 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3IA0A087WXS9 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3EA0A087X179 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3KA0A087X1G2 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 A0A1W2PPC4 97 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 A0A1W2PQU0 124 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3FA6NER0 549 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3LB9A6J9 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 RNGTTO60942 597 aaKnown RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 NDST3O95803 873 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 FGF1P05230 155 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 POLBP06746 335 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 PDHA1P08559 390 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3HP0C7X1 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CD27P26842 260 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 RPS21P63220 83 aaKnown RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 CDK18Q07002 472 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 RALGDSQ12967 914 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 NAB1Q13506 487 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 AGERQ15109 404 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3GQ6DHY5 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3CQ6IPX1 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CASC4Q6P4E1 433 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CES3Q6UWW8 571 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 MARK2Q7KZI7 788 aaKnown RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 DPPA4Q7L190 304 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 UNC5BQ8IZJ1 945 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TBC1D3Q8IZP1 549 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 CBARPQ8N350 705 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 DEFB119Q8N690 84 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 MZB1Q8WU39 189 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 ZNF669Q96BR6 464 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 MFSD3Q96ES6 412 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 SCRN2Q96FV2 425 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 LYSMD1Q96S90 227 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 EBF2Q9HAK2 575 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CHRAC1Q9NRG0 131 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TREX1Q9NSU2 369 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 TMEM74BQ9NUR3 256 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 SAMD15Q9P1V8 674 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 PSMC3IPQ9P2W1 217 aaPredicted RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 GGT7Q9UJ14 662 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 ZNF180Q9UJW8 692 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 NOVA2Q9UNW9 492 aaKnown RBP10.58□□□□□ -0.72
ATL3-204ENST00000540699 DMTF1Q9Y222 760 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 ITM2BQ9Y287 266 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 RPS6KL1Q9Y6S9 549 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.72
ATL3-204ENST00000540699 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ASPMQ8IZT6 3477 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ZNF106Q9H2Y7 1883 aaKnown RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 A0A0J9YYE9 177 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 FAM47DPA6NHR8 397 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 MEI4A8MW99 385 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 POC1B-GALNT4F8VUJ3 575 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 PIAS1O75925 651 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 FSBPO95073 299 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 PCDH8O95206 1070 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 TRBC1P01850 177 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 ZNF806P0C7X5 589 aa10.57□□□□□ -0.72
ATL3-204ENST00000540699 XPAP23025 273 aaPredicted RBP10.57□□□□□ -0.72
ATL3-204ENST00000540699 ADRA1DP25100 572 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms