RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 IGFBP5P24593 272 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 CD97P48960 835 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 SLC11A2P49281 568 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 CPT1AP50416 773 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 NDRG1Q92597 394 aaKnown RBP12.98□□□□□ -0.33
DNMT1-203ENST00000540357 FBXL20Q96IG2 436 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
DNMT1-203ENST00000540357 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 DKK3Q9UBP4 350 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
DNMT1-203ENST00000540357 SAMD4AQ9UPU9 718 aaKnown RBP12.98□□□□□ -0.33
DNMT1-203ENST00000540357 SNTNA6NMZ2 147 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 VILLO15195 856 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TP73O15350 636 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 BNIP3LO60238 219 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TSPAN1O60635 241 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 CCNKO75909 580 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 GUCA1CO95843 209 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 MTHFD1P11586 935 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 BMP2P12643 396 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 HLA-DPA1P20036 260 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 KPNA1P52294 538 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TPTEP56180 551 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 CRY1Q16526 586 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 PRR23BQ6ZRT6 265 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 LPCAT1Q8NF37 534 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ST13P5Q8NFI4 369 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 PPM1MQ96MI6 270 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 FBXO44Q9H4M3 255 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF221Q9UK13 617 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 LZTS3O60299 673 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 OR1E1P30953 314 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 GSSP48637 474 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TTPAP49638 278 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 RPL38P63173 70 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF177Q13360 481 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 NAPRTQ6XQN6 538 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 MIB1Q86YT6 1006 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 DEPDC4Q8N2C3 294 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZNF597Q96LX8 424 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 FCRL3Q96P31 734 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 MEAF6Q9HAF1 191 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 IKZF3Q9UKT9 509 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 KIAA1551Q9HCM1 1747 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ELOVL7A1L3X0 281 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 FAM234BA2RU67 622 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 NEMP2A6NFY4 417 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 SLC7A4O43246 635 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 EPN2O95208 641 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 BDNFP23560 247 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 YAP1P46937 504 aaKnown RBP12.97□□□□□ -0.33
DNMT1-203ENST00000540357 WNT7BP56706 349 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TGFBIQ15582 683 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 STARD8Q92502 1023 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 SLC39A3Q9BRY0 314 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
DNMT1-203ENST00000540357 LRIG2O94898 1065 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 ALDH3A2P51648 485 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 OLR1P78380 273 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 MS4A2Q01362 244 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 KIAA1841Q6NSI8 718 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 SPPL2AQ8TCT8 520 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 KBTBD7Q8WVZ9 684 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 MTERF3Q96E29 417 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 TPD52L3Q96J77 140 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 TRIM45Q9H8W5 580 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 EMCNQ9ULC0 261 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 G3V2L1 256 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 DNAJB5O75953 348 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 C8BP07358 591 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 NR4A1P22736 598 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 NCF4Q15080 339 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 CNSTQ6PJW8 725 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 FBXO32Q969P5 355 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 SNX27Q96L92 541 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 COQ7Q99807 217 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 ZYG11BQ9C0D3 744 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 KAT8Q9H7Z6 458 aaKnown RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 MTRRQ9UBK8 725 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 POLR3HQ9Y535 204 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 MAGEB3O15480 346 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 RPP40O75818 363 aaKnown RBP12.96□□□□□ -0.33
DNMT1-203ENST00000540357 UGT2B4P06133 528 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 YWHAQP27348 245 aa12.96□□□□□ -0.33
DNMT1-203ENST00000540357 ATP6V1E1P36543 226 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms