RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 EBNA1BP2Q99848 306 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 RNF19AQ9NV58 838 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 RAPGEFL1Q9UHV5 662 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 TRAV6A0A075B6T7 132 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 SLC22A1O15245 554 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 RFPL1O75677 317 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 CDKN2BP42772 138 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 MTMR1Q13613 665 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 GALEQ14376 348 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 RFX4Q33E94 735 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 TIGD7Q6NT04 549 aaPredicted RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 ZNF605Q86T29 641 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 MED28Q9H204 178 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 MPP6Q9NZW5 540 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ACOT9Q9Y305 439 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 KCNE2Q9Y6J6 123 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 PMPCBO75439 489 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 DCKP27707 260 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 GOLGA7BQ2TAP0 167 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 RABL3Q5HYI8 236 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ZNF667Q5HYK9 610 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 TMEM203Q969S6 136 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ADGRE2Q9UHX3 823 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 FAM240BA0A1B0GVZ2 78 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 PLK4O00444 970 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 SPATA31C1P0DKV0 1188 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 PAMP19021 973 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ICAM3P32942 547 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 SHMT2P34897 504 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 SLC26A2P50443 739 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 WSCD2Q2TBF2 565 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 CACHD1Q5VU97 1274 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 DENND1CQ8IV53 801 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 CPA6Q8N4T0 437 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 RPL3LQ92901 407 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 ZC3H12CQ9C0D7 883 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 DYRK4Q9NR20 520 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 INTS10Q9NVR2 710 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 CROCCQ5TZA2 2017 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 SLC35F4A4IF30 521 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 DYNC1LI2O43237 492 aaPredicted RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 CYP3A4P08684 503 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 FOSL1P15407 271 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 PTPN5P54829 565 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 P2RX3P56373 397 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ORC2Q13416 577 aaPredicted RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 PLET1Q6UQ28 207 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 DET1Q7L5Y6 550 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 HBEGFQ99075 208 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 KAT8Q9H7Z6 458 aaKnown RBP11.05□□□□□ -0.64
PBX1-212ENST00000540236 DNAJC11Q9NVH1 559 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 PCDHAC2Q9Y5I4 1007 aa11.05□□□□□ -0.64
PBX1-212ENST00000540236 TREHO43280 583 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 POU2F1P14859 743 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 MYF6P23409 242 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 MYL6P60660 151 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 TIGD6Q17RP2 521 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 ZNF404Q494X3 552 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 TTC23Q5W5X9 447 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 ZCCHC12Q6PEW1 402 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 NT5DC4Q86YG4 428 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 SLC34A3Q8N130 599 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 CRNNQ9UBG3 495 aaPredicted RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 PSAT1Q9Y617 370 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 TRAV20A0A0B4J274 112 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 SH3BGRLO75368 114 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 HGFP14210 728 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 CERCAMQ5T4B2 595 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 PRMT9Q6P2P2 845 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 MOXD1Q6UVY6 613 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 METTL4Q8N3J2 472 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 SPATA9Q9BWV2 254 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 ABI2Q9NYB9 513 aaPredicted RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 NFKBIL1Q9UBC1 381 aaPredicted RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 TJP2Q9UDY2 1190 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 CRYL1Q9Y2S2 319 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 B8ZZF3 427 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 SSX5O60225 188 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 IGFBP5P24593 272 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 RXRBP28702 533 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 NAB1Q13506 487 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 MAVSQ7Z434 540 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 KBTBD8Q8NFY9 601 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 KCNC2Q96PR1 638 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 C17orf62Q9BQA9 187 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
PBX1-212ENST00000540236 KCNN3Q9UGI6 736 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
PBX1-212ENST00000540236 A0A0G2JPF8 293 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms