RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 LBRQ14739 615 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 IYDQ6PHW0 289 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ADAMTSL4Q6UY14 1074 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ARHGAP36Q6ZRI8 547 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 MARK2Q7KZI7 788 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 LYSMD3Q7Z3D4 306 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 TMEM135Q86UB9 458 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 SLC9B2Q86UD5 537 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 NLRP8Q86W28 1048 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 PHF13Q86YI8 300 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 PLXDC1Q8IUK5 500 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ARHGAP12Q8IWW6 846 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 PDCD6IPQ8WUM4 868 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 SCRN2Q96FV2 425 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 CNPY3Q9BT09 278 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 TWSG1Q9GZX9 223 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 EPB41L1Q9H4G0 881 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 STN1Q9H668 368 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 SIDT1Q9NXL6 827 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 LRBAP50851 2863 aa11.54□□□□□ -0.56
CLSTN3-209ENST00000539982 ESPL1Q14674 2120 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 PRRC2CQ9Y520 2896 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 TCRBV5S1A1TA0A578 114 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 A1L4Q6 167 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 PIPSLA2A3N6 862 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 NPIPB15A6NHN6 443 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 DFFAO00273 331 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 DAPK3O43293 454 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 CREG1O75629 220 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 CPP00450 1065 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 CCNYL3P0C7X3 344 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 MAPK9P45984 424 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 SEMA5AQ13591 1074 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 IL11RAQ14626 422 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 MLKLQ8NB16 471 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 AP2M1Q96CW1 435 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 ZNF599Q96NL3 588 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 ABCG8Q9H221 673 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 VPS16Q9H269 839 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 ZNHIT2Q9UHR6 403 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 PPIL1Q9Y3C6 166 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 PCDHGA6Q9Y5G7 932 aa11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 OAS3Q9Y6K5 1087 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-209ENST00000539982 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.56
CLSTN3-209ENST00000539982 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 C9P02748 559 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 PYGLP06737 847 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 SLC2A4P14672 509 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 ERCC2P18074 760 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 SOX5P35711 763 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 HSPA9P38646 679 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 RPL7AP62424 266 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 PTPRRQ15256 657 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 RFLNAQ6ZTI6 216 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 CHST15Q7LFX5 561 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 MAMDC2Q7Z304 686 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 TSPAN33Q86UF1 283 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 TRIM74Q86UV6 250 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 EXD1Q8NHP7 514 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 FNIP1Q8TF40 1166 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 SCAMP4Q969E2 229 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 STAMBPL1Q96FJ0 436 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 COX14Q96I36 57 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 C9orf72Q96LT7 481 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 NOD2Q9HC29 1040 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 CASS4Q9NQ75 786 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 GPATCH2LQ9NWQ4 482 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 CNOT8Q9UFF9 292 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 CD84Q9UIB8 345 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 PADI1Q9ULC6 663 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 AP4E1Q9UPM8 1137 aa11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 MN1Q10571 1320 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-209ENST00000539982 KIR2DS5A0A0G2JLQ3 304 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 A0A0G2JNG1 304 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 A6NCN8 305 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 GOLGA6L3A6NEY3 463 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 OR5K4A6NMS3 321 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 KIR2DS3K7RE56 304 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 DNAJC6O75061 913 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 GADD45BO75293 160 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 DNAJB5O75953 348 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 KIAA0754O94854 1291 aa11.51□□□□□ -0.57
CLSTN3-209ENST00000539982 NDUFA10O95299 355 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms