RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MTSS1LQ765P7 747 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 CEP97Q8IW35 865 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 CCDC197Q8NCU1 140 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 TTC8Q8TAM2 541 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.83■□□□□ 0.28
COPS3-212ENST00000539941 MSLNLQ96KJ4 702 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 ASB2Q96Q27 587 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 POPDC3Q9HBV1 291 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 DKK3Q9UBP4 350 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 APPL1Q9UKG1 709 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 STARD13Q9Y3M8 1113 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 WASF2Q9Y6W5 498 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 SNX3O60493 162 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 NDUFS3O75489 264 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 RPSAP08865 295 aaKnown RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 CCNG1P51959 295 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 IRF9Q00978 393 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 DLX2Q07687 328 aaPredicted RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 TJAP1Q5JTD0 557 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 C16orf46Q6P387 395 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 LDB1Q86U70 411 aaPredicted RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 PLD6Q8N2A8 252 aaKnown RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 DRAXINQ8NBI3 349 aaPredicted RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 RDH11Q8TC12 318 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 EID2BQ96D98 161 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 PLA2G2FQ9BZM2 168 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 ZNF106Q9H2Y7 1883 aaKnown RBP16.82■□□□□ 0.28
COPS3-212ENST00000539941 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 IL36AQ9UHA7 158 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 BAIAP2L1Q9UHR4 511 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 SLC30A1Q9Y6M5 507 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 SCN8AQ9UQD0 1980 aa16.82■□□□□ 0.28
COPS3-212ENST00000539941 PRRT4C9JH25 899 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 KLHL2O95198 593 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 BGNP21810 368 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 GJA4P35212 333 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 OPRD1P41143 372 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 ADARP55265 1226 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 ROR2Q01974 943 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 GRM2Q14416 872 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 PTPRRQ15256 657 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 ZDHHC20Q5W0Z9 365 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CERS6Q6ZMG9 384 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 FAM47EQ6ZV65 393 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 TBC1D1Q86TI0 1168 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 CENPLQ8N0S6 344 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 STK40Q8N2I9 435 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 GRIN3AQ8TCU5 1115 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 LPGAT1Q92604 370 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 NXPE3Q969Y0 559 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 KLHL32Q96NJ5 620 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 NDNQ99608 321 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 OLFM1Q99784 485 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 ELAC2Q9BQ52 826 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 KXD1Q9BQD3 176 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 AARSD1Q9BTE6 412 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 POMKQ9H5K3 350 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 BRD9Q9H8M2 597 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 BPIFA1Q9NP55 256 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 EPS15L1Q9UBC2 864 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 COPG2Q9UBF2 871 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 SLC12A4Q9UP95 1085 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 COMMD10Q9Y6G5 202 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 TTC28Q96AY4 2481 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 MUC22E2RYF6 1773 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 EDDM13A0A1B0GTR0 161 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 NPIPB15A6NHN6 443 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 CLDN7O95471 211 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 ANP32DO95626 131 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CYP2A6P11509 494 aaPredicted RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 FDXRP22570 491 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 LTBRP36941 435 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 SUOXP51687 545 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 TFF2Q03403 129 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 KDSRQ06136 332 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CMPK2Q5EBM0 449 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 ZRANB3Q5FWF4 1079 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CRTC1Q6UUV9 634 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 PARM1Q6UWI2 310 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 SPATA21Q7Z572 469 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 SREK1Q8WXA9 508 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 DTNBP1Q96EV8 351 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 TTC1Q99614 292 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 PLCD4Q9BRC7 762 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 TRMT61BQ9BVS5 477 aaKnown RBP16.81■□□□□ 0.28
COPS3-212ENST00000539941 TSSK1BQ9BXA7 367 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CCDC68Q9H2F9 335 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 CRYL1Q9Y2S2 319 aa16.81■□□□□ 0.28
COPS3-212ENST00000539941 MUC3AQ02505 3323 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 LEFTY1O75610 366 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 WISP3O95389 354 aaPredicted RBP16.8■□□□□ 0.28
COPS3-212ENST00000539941 CPA3P15088 417 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 ZNF30P17039 623 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 ITGALP20701 1170 aa16.8■□□□□ 0.28
COPS3-212ENST00000539941 CD9P21926 228 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms