RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 STAMBPO95630 424 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PF4P02776 101 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SRFP11831 508 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 CD19P15391 556 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SDHBP21912 280 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ARRB2P32121 409 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TMBIM6P55061 237 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 OXCT1P55809 520 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 C21orf59P57076 290 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PSME3P61289 254 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PFKPQ01813 784 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 POU5F1BQ06416 359 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 NSUN2Q08J23 767 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 INCA1Q0VD86 236 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 GALNT1Q10472 559 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MXD4Q14582 209 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PUM1Q14671 1186 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TGFBIQ15582 683 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PSMD5Q16401 504 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 LSM12Q3MHD2 195 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PKDCCQ504Y2 493 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SAMD4BQ5PRF9 694 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 FAM102AQ5T9C2 384 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TWF2Q6IBS0 349 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 GRAMD4Q6IC98 578 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 KRT80Q6KB66 452 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 FAM45BPQ6NSW5 357 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PRMT9Q6P2P2 845 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 DCLRE1AQ6PJP8 1040 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TMC5Q6UXY8 1006 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ATG14Q6ZNE5 492 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 DCDC5Q6ZRR9 648 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MRPL10Q7Z7H8 261 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM173Q86WV6 379 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 AFAP1L2Q8N4X5 818 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 C12orf76Q8N812 135 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF781Q8N8C0 355 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ANKRD52Q8NB46 1076 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 RNF169Q8NCN4 708 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 FLCNQ8NFG4 579 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 BHLHE22Q8NFJ8 381 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SHKBP1Q8TBC3 707 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 FAM45AQ8TCE6 357 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 URGCPQ8TCY9 931 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 HTR3CQ8WXA8 447 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 NKD1Q969G9 470 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ELMO3Q96BJ8 720 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SHDQ96IW2 340 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SLC45A3Q96JT2 553 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 KLHL5Q96PQ7 755 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 CYP2S1Q96SQ9 504 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TCF12Q99081 682 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 C1orf50Q9BV19 199 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TRIM15Q9C019 465 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SMOC2Q9H3U7 446 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 ASB7Q9H672 318 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PTPRHQ9HD43 1115 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SLC2A4RGQ9NR83 387 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 SNX15Q9NRS6 342 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 APPL1Q9UKG1 709 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TLR6Q9Y2C9 796 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MSRB2Q9Y3D2 182 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 WDR27A2RRH5 827 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM247A6NEH6 219 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 LRRIQ4A6NIV6 560 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 NT5C1B-RDH14C9J2C7 533 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SPTBN2O15020 2390 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SMAD7O15105 426 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 EFSO43281 561 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 MTSS1O43312 755 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 AKAP10O43572 662 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PI15O43692 258 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 KLHL41O60662 606 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SORBS2O94875 1100 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 EFEMP2O95967 443 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SOD2P04179 222 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 URODP06132 367 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CNPP09543 421 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 FCGR1AP12314 374 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CYP2F1P24903 491 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SDC4P31431 198 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 RPL34P49207 117 aaKnown RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SLC11A1P49279 550 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 BCAP31P51572 246 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SLC6A3Q01959 620 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 GSTM4Q03013 218 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CREMQ03060 361 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CAMK2GQ13555 558 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-204ENST00000539847 CCINQ13939 588 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 LRP8Q14114 963 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 SQLEQ14534 574 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PPP2R5DQ14738 602 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 PDK1Q15118 436 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 TAF5Q15542 800 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 BCL2A1Q16548 175 aa7.65□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF528Q3MIS6 628 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms