RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 PTK6Q13882 451 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 KCNJ11Q14654 390 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 SHBQ15464 509 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 PRAMEF14Q5SWL7 426 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 ALS2CLQ60I27 953 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 SYDE1Q6ZW31 735 aaPredicted RBP17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 TRAM1L1Q8N609 369 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 SPATA4Q8NEY3 305 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 DTX3LQ8TDB6 740 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 WDR92Q96MX6 357 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 ZSCAN5AQ9BUG6 496 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 LGR4Q9BXB1 951 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 PIH1D1Q9NWS0 290 aaKnown RBP17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 CDC23Q9UJX2 597 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 PCDHGB2Q9Y5G2 931 aa17.27■□□□□ 0.36
SLC3A2-213ENST00000539458 LDB2O43679 373 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 BUD23O43709 281 aaKnown RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 URI1O94763 535 aaPredicted RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 CSF2P04141 144 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 NME1P15531 152 aaKnown RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 EPHA8P29322 1005 aaPredicted RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 SPAM1P38567 509 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 ZNF140P52738 457 aaPredicted RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 CKAP4Q07065 602 aaKnown RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 EIF2B5Q13144 721 aaKnown RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 POU6F1Q14863 301 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 PDPK2PQ6A1A2 396 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 ENPP7Q6UWV6 458 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 ZNF572Q7Z3I7 529 aaPredicted RBP17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 CPT1BQ92523 772 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 HIC2Q96JB3 615 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 KCTD3Q9Y597 815 aa17.26■□□□□ 0.35
SLC3A2-213ENST00000539458 ACACBO00763 2458 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 FADS2P1A8MWK0 482 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 H3BM21 787 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 TNFRSF10CO14798 259 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 PCDHGA12O60330 932 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 HNRNPKP61978 463 aaKnown RBP eCLIP17.25■□□□□ 0.353e-8■■■□□ 15.6
SLC3A2-213ENST00000539458 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 IL9RQ01113 521 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 SEPT6Q14141 434 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 WHAMMP3Q1A5X7 153 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 UAP1L1Q3KQV9 507 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 CERCAMQ5T4B2 595 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 JAMLQ86YT9 394 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 OR4K2Q8NGD2 314 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 OR56A4Q8NGH8 313 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 BTN2A2Q8WVV5 523 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 COX14Q96I36 57 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 KRT12Q99456 494 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 IL26Q9NPH9 171 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 KLQ9UEF7 1012 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 ASIC3Q9UHC3 531 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 PNMA8BQ9ULN7 279 aaPredicted RBP17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 MYLKQ15746 1914 aa17.25■□□□□ 0.35
SLC3A2-213ENST00000539458 PI4KAP42356 2102 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 CACNA1EQ15878 2313 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 GLYATL1P3A0A0U1RQE8 302 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 TCRBV7S3A2A0A539 114 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 TMEM202A6NGA9 273 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 INPP4BO15327 924 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 TMEM63AO94886 807 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 CD59P13987 128 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 ADCY8P40145 1251 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 HADHAP40939 763 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 TERF1P54274 439 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 SRP54P61011 504 aaKnown RBP17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 PPARDQ03181 441 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 C2orf54Q08AI8 447 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 LAMB3Q13751 1172 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 PTPRCAPQ14761 206 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 SUZ12Q15022 739 aaKnown RBP17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 ALG11Q2TAA5 492 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 ZNF542PQ5EBM4 170 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 ANKRD22Q5VYY1 191 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 LRRC8BQ6P9F7 803 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 ZNF534Q76KX8 674 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 PPIL6Q8IXY8 311 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 PHACTR4Q8IZ21 702 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 SAP25Q8TEE9 199 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 VPS35Q96QK1 796 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 FRMD8Q9BZ67 464 aaPredicted RBP17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 FGF22Q9HCT0 170 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 KLF15Q9UIH9 416 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 APPL1Q9UKG1 709 aa17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 CNOT6Q9ULM6 557 aaKnown RBP17.24■□□□□ 0.35
SLC3A2-213ENST00000539458 LAMA1P25391 3075 aa17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 MROH6A6NGR9 719 aa17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 GAPDHSO14556 408 aaPredicted RBP17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 DNALI1O14645 258 aaPredicted RBP17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 FLRT2O43155 660 aa17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 TTI1O43156 1089 aa17.23■□□□□ 0.35
SLC3A2-213ENST00000539458 PIAS2O75928 621 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms