RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KLF6Q99612 283 aaPredicted RBP23.39■■□□□ 1.33
TMEM260-202ENST00000538838 LRFN3Q9BTN0 628 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 SPATA16Q9BXB7 569 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 C1QTNF7Q9BXJ2 289 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 CDH19Q9H159 772 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 PCED1AQ9H1Q7 454 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 MBNL1Q9NR56 388 aaKnown RBP23.39■■□□□ 1.33
TMEM260-202ENST00000538838 C20orf96Q9NUD7 363 aaPredicted RBP23.39■■□□□ 1.33
TMEM260-202ENST00000538838 ZSCAN32Q9NX65 697 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 APPL1Q9UKG1 709 aa23.39■■□□□ 1.33
TMEM260-202ENST00000538838 SPAG17Q6Q759 2223 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 FANCMQ8IYD8 2048 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 UQCRHLA0A096LP55 91 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 HRO43593 1189 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 SRP72O76094 671 aaKnown RBP23.38■■□□□ 1.33
TMEM260-202ENST00000538838 UQCRHP07919 91 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 PRSS56P0CW18 603 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 LRRC14Q15048 493 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 C3orf62Q6ZUJ4 267 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 PTAR1Q7Z6K3 402 aaPredicted RBP23.38■■□□□ 1.33
TMEM260-202ENST00000538838 CERS2Q96G23 380 aa23.38■■□□□ 1.33
TMEM260-202ENST00000538838 METTL12A8MUP2 240 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 FADS2P1A8MWK0 482 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 SOD1P00441 154 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 CA5AP35218 305 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 IGFALSP35858 605 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 DPTQ07507 201 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 BRD3Q15059 726 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 MAP9Q49MG5 647 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ZRANB3Q5FWF4 1079 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 RAET1GQ6H3X3 334 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 TRMT10CQ7L0Y3 403 aaKnown RBP23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ARMCX6Q7L4S7 300 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 KCNMB4Q86W47 210 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 TRAM1L1Q8N609 369 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 OR4L1Q8NH43 312 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 CENPTQ96BT3 561 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 FAM96AQ9H5X1 160 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 KCTD5Q9NXV2 234 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 CA5BQ9Y2D0 317 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 SLC30A1Q9Y6M5 507 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 TCRBV9S1A1TA0A576 114 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 CCDC151A5D8V7 595 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 MEI4A8MW99 385 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 GSTA2P09210 222 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ERVK-10P10266 1014 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 HNRNPA2B1P22626 353 aaKnown RBP23.37■■□□□ 1.33
TMEM260-202ENST00000538838 FOXN2P32314 431 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 CDKN1CP49918 316 aaPredicted RBP23.37■■□□□ 1.33
TMEM260-202ENST00000538838 NUBP1P53384 320 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 PTPN5P54829 565 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ATP13A5Q4VNC0 1218 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 PDPK2PQ6A1A2 396 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ZBTB44Q8NCP5 570 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 ZSCAN5AQ9BUG6 496 aa23.37■■□□□ 1.33
TMEM260-202ENST00000538838 PPANQ9NQ55 473 aaKnown RBP23.37■■□□□ 1.33
TMEM260-202ENST00000538838 RIPK2O43353 540 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A9O60656 530 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 SPAG6O75602 509 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A6P19224 532 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A1P22309 533 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A4P22310 534 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A3P35503 534 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A5P35504 534 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 NFATC2Q13469 925 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 PSAPL1Q6NUJ1 521 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 LPCAT2Q7L5N7 544 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 OTUD6BQ8N6M0 293 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 PNPLA1Q8N8W4 532 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 DENND6BQ8NEG7 585 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UHMK1Q8TAS1 419 aaKnown RBP23.36■■□□□ 1.33
TMEM260-202ENST00000538838 LENG8Q96PV6 779 aaPredicted RBP23.36■■□□□ 1.33
TMEM260-202ENST00000538838 ORAI3Q9BRQ5 295 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 DUSP15Q9H1R2 295 aaPredicted RBP23.36■■□□□ 1.33
TMEM260-202ENST00000538838 EPB41L4BQ9H329 900 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 ASB8Q9H765 288 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A7Q9HAW7 530 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A10Q9HAW8 530 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 UGT1A8Q9HAW9 530 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 CATSPERZQ9NTU4 200 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 MARCH4Q9P2E8 410 aaPredicted RBP23.36■■□□□ 1.33
TMEM260-202ENST00000538838 SLC17A6Q9P2U8 582 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 SLCO1B1Q9Y6L6 691 aa23.36■■□□□ 1.33
TMEM260-202ENST00000538838 A0A1W2PPC4 97 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 ERLIN1O75477 346 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 PIAS1O75925 651 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 TSHRP16473 764 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 ITGALP20701 1170 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 PTGER3P43115 390 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 GPR1P46091 355 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 CLDN2P57739 230 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 CACNG1Q06432 222 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 FRG1Q14331 258 aaKnown RBP23.35■■□□□ 1.33
TMEM260-202ENST00000538838 SEMA3AQ14563 771 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 UAP1Q16222 522 aaPredicted RBP23.35■■□□□ 1.33
TMEM260-202ENST00000538838 HSP90AA5PQ58FG0 334 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 PMS2CLQ68D20 193 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 PNCKQ6P2M8 343 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 SNX20Q7Z614 316 aa23.35■■□□□ 1.33
TMEM260-202ENST00000538838 C11orf74Q86VG3 221 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms