RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 NFKB2Q00653 900 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 RAD51Q06609 339 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 FAM109BQ6ICB4 259 aaPredicted RBP20.31■□□□□ 0.84
DDX55-205ENST00000538744 CERS6Q6ZMG9 384 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 RBM23Q86U06 439 aaKnown RBP20.31■□□□□ 0.84
DDX55-205ENST00000538744 RHEBL1Q8TAI7 183 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 STON2Q8WXE9 905 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 UTP4Q969X6 686 aaKnown RBP20.31■□□□□ 0.84
DDX55-205ENST00000538744 FAM136AQ96C01 138 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 BTBD10Q9BSF8 475 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 CPEB1Q9BZB8 566 aaKnown RBP20.31■□□□□ 0.84
DDX55-205ENST00000538744 DERL2Q9GZP9 239 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 TFB2MQ9H5Q4 396 aaKnown RBP20.31■□□□□ 0.84
DDX55-205ENST00000538744 TAGLN3Q9UI15 199 aa20.31■□□□□ 0.84
DDX55-205ENST00000538744 AOC1P19801 751 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 RIPK1Q13546 671 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 UBAP2LQ14157 1087 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 CDKN3Q16667 212 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SLC9B1Q4ZJI4 515 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SETMARQ53H47 684 aaPredicted RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 CARD16Q5EG05 197 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 PAQR3Q6TCH7 311 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 LONP2Q86WA8 852 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ADGRG2Q8IZP9 1017 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 MAPK15Q8TD08 544 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SMG7Q92540 1137 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 GPR21Q99679 349 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SUV39H2Q9H5I1 410 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 EML4Q9HC35 981 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 ATG2AQ2TAZ0 1938 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 MYO7AQ13402 2215 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 PRR5-ARHGAP8B1AHC4 643 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 GRID2O43424 1007 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 BNIP3LO60238 219 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 OR1I1O60431 355 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 POP4O95707 220 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 ESR1P03372 595 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 TPBGLP0DKB5 382 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 IMPDH1P20839 514 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 PPARGP37231 505 aaPredicted RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 KCNC1P48547 511 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 CCNHP51946 323 aaPredicted RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 ATP6V0D1P61421 351 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ARHGAP8P85298 464 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 CTSL3PQ5NE16 218 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 C9orf50Q5SZB4 431 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 METTL21CQ5VZV1 264 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ADGRD2Q7Z7M1 963 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ADIPOR2Q86V24 386 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ZSWIM9Q86XI8 627 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 AHI1Q8N157 1196 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 NKAPQ8N5F7 415 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 CELF5Q8N6W0 485 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 ECHDC3Q96DC8 303 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 PHF21BQ96EK2 531 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 L3HYPDHQ96EM0 354 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 LYSMD1Q96S90 227 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SHCBP1LQ9BZQ2 653 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 ZDHHC6Q9H6R6 413 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX55-205ENST00000538744 TRMT6Q9UJA5 497 aaKnown RBP20.3■□□□□ 0.84
DDX55-205ENST00000538744 APPL1Q9UKG1 709 aa20.3■□□□□ 0.84
DDX55-205ENST00000538744 GYG2O15488 501 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 CLDN7O95471 211 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 PRAMEF1O95521 474 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 OR4D1Q15615 310 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 FAM151BQ6UXP7 276 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 RINLQ6ZS11 566 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 FRMD7Q6ZUT3 714 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 KIAA0907Q7Z7F0 614 aaPredicted RBP20.29■□□□□ 0.84
DDX55-205ENST00000538744 ITFG1Q8TB96 612 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 GRIN3AQ8TCU5 1115 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 KCNJ9Q92806 393 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 VOPP1Q96AW1 172 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 ZNF641Q96N77 438 aaPredicted RBP20.29■□□□□ 0.84
DDX55-205ENST00000538744 TRMOQ9BU70 441 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 TCF7L2Q9NQB0 619 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 GTSE1Q9NYZ3 720 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 PCDHB1Q9Y5F3 818 aa20.29■□□□□ 0.84
DDX55-205ENST00000538744 SPECC1L-ADORA2AF8WAN1 911 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 H3BMM5 538 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 NIPSNAP2O75323 286 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 BMP1P13497 986 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 POLR2EP19388 210 aaKnown RBP20.28■□□□□ 0.84
DDX55-205ENST00000538744 ITGALP20701 1170 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 SP100P23497 879 aaPredicted RBP20.28■□□□□ 0.84
DDX55-205ENST00000538744 GALNT1Q10472 559 aaPredicted RBP20.28■□□□□ 0.84
DDX55-205ENST00000538744 SNCBQ16143 134 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 GRAMD4Q6IC98 578 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 DPY19L3Q6ZPD9 716 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 ACAD11Q709F0 780 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 USP45Q70EL2 814 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 SNX20Q7Z614 316 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 AFAP1L2Q8N4X5 818 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 KDM1BQ8NB78 822 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 EXT2Q93063 718 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 KIAA1191Q96A73 305 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 FAR2Q96K12 515 aa20.28■□□□□ 0.84
DDX55-205ENST00000538744 TTC1Q99614 292 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms