RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 C9JVG2 144 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 CDC7O00311 574 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 BFSP2Q13515 415 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 GRB7Q14451 532 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 PTPRNQ16849 979 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 IL23RQ5VWK5 629 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 RNF219Q5W0B1 726 aaPredicted RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 PSAPL1Q6NUJ1 521 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 PIANPQ8IYJ0 282 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 STAG3L4Q8TBR4 150 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 KIAA1191Q96A73 305 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SLC30A3Q99726 388 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 RNF38Q9H0F5 515 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 HMX1Q9NP08 348 aaPredicted RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SPATS2LQ9NUQ6 558 aaKnown RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SUCOQ9UBS9 1254 aaKnown RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 RAI2Q9Y5P3 530 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SCN5AQ14524 2016 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 OR1I1O60431 355 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 DNAJA2O60884 412 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 RNASEH2AO75792 299 aaKnown RBP24.79■■□□□ 1.56
RAB40C-204ENST00000538492 SEC24AO95486 1093 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 ISLR2Q6UXK2 745 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 FBXO39Q8N4B4 442 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 TUBB1Q9H4B7 451 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 FKBPLQ9UIM3 349 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 TRIM24O15164 1050 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 KERAO60938 352 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 LINC00032P0C843 101 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 GPX3P22352 226 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 PITRM1Q5JRX3 1037 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 SLC8B1Q6J4K2 584 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 CYP2R1Q6VVX0 501 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 CRIPAKQ8N1N5 446 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 MRPL9Q9BYD2 267 aaKnown RBP24.79■■□□□ 1.56
RAB40C-204ENST00000538492 DERL2Q9GZP9 239 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 CROTQ9UKG9 612 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 SARDHQ9UL12 918 aa24.79■■□□□ 1.56
RAB40C-204ENST00000538492 ILVBLA1L0T0 632 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 NPEPPSL1A6NEC2 478 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 ECI2O75521 394 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 FGF4P08620 206 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 TUFMP49411 452 aaKnown RBP24.78■■□□□ 1.56
RAB40C-204ENST00000538492 ECT2LQ008S8 904 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 RAD51Q06609 339 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 KANK2Q63ZY3 851 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 GALNT4Q8N4A0 578 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 ASB2Q96Q27 587 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 TMEM175Q9BSA9 504 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 IL1RL2Q9HB29 575 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 PHF24Q9UPV7 400 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 A0A0J9YYE9 177 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 C2orf78A6NCI8 922 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 NR5A2O00482 541 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 SNAP91O60641 907 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 HMGA1P17096 107 aaKnown RBP24.78■■□□□ 1.56
RAB40C-204ENST00000538492 PSMD8P48556 350 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 CLCQ05315 142 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 FAM126BQ8IXS8 530 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 TUBGCP3Q96CW5 907 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 LRCH3Q96II8 777 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 BIRC8Q96P09 236 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 SMPD4Q9NXE4 827 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 GMPR2Q9P2T1 348 aaKnown RBP24.78■■□□□ 1.56
RAB40C-204ENST00000538492 ARIH1Q9Y4X5 557 aaPredicted RBP24.78■■□□□ 1.56
RAB40C-204ENST00000538492 AK5Q9Y6K8 562 aa24.78■■□□□ 1.56
RAB40C-204ENST00000538492 A0A1B0GVM2 712 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 LCHNA4D1U4 455 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 BTN3A1O00481 513 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 NIPSNAP2O75323 286 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 LPOP22079 712 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 MC4RP32245 332 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ALDH7A1P49419 539 aaKnown RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ILF2Q12905 390 aaKnown RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 NOGQ13253 232 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 RETREG3Q86VR2 466 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ST13P4Q8IZP2 240 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 PDZD8Q8NEN9 1154 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 MTRRQ9UBK8 725 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 EME2A4GXA9 379 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ACADVLP49748 655 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 SLC7A2P52569 658 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ARF5P84085 180 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 SIDT2Q8NBJ9 832 aaKnown RBP24.77■■□□□ 1.56
RAB40C-204ENST00000538492 PLD4Q96BZ4 506 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 SLC45A3Q96JT2 553 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 VN1R3Q9BXE9 311 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 SEMA6AQ9H2E6 1030 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 TIMM22Q9Y584 194 aa24.77■■□□□ 1.56
RAB40C-204ENST00000538492 ANKRD66B4E2M5 251 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 GPR39O43194 453 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 F11P03951 625 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 AGTR2P50052 363 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 ATP4BP51164 291 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 USP41Q3LFD5 358 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 ZRANB3Q5FWF4 1079 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 ADGRF1Q5T601 910 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 KIAA1841Q6NSI8 718 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 UGT2A3Q6UWM9 527 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 FUBP1Q96AE4 644 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms