RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	TMPRSS7	Q7RTY8	843 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SLC35F3	Q8IY50	421 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TXLNB	Q8N3L3	684 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SLC25A41	Q8N5S1	370 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	IPMK	Q8NFU5	416 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CCDC110	Q8TBZ0	833 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ATG4A	Q8WYN0	398 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	FCRL5	Q96RD9	977 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TSGA10	Q9BZW7	698 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TMEM168	Q9H0V1	697 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	USP29	Q9HBJ7	922 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PLSCR2	Q9NRY7	297 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SIRPG	Q9P1W8	387 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	FAM153A	Q9UHL3	310 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	RSPH14	Q9UHP6	348 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TMEM98	Q9Y2Y6	226 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ZNF711	Q9Y462	761 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PCDHGA1	Q9Y5H4	931 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	DGKB	Q9Y6T7	804 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	USP24	Q9UPU5	2620 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	LOC285095	A0A1B0GVY8	99 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	MTSS1	O43312	755 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	KRT86	O43790	486 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	NDST3	O95803	873 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	AGT	P01019	485 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TNF	P01375	233 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ATP1A1	P05023	1023 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ANXA6	P08133	673 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	HOXC4	P09017	264 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CCDC175	P0C221	793 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ALPPL2	P10696	532 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CTSE	P14091	401 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PSMB4	P28070	264 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	GDF10	P55107	478 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	INSM1	Q01101	510 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SLC14A2	Q15849	920 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SIRPB2	Q5JXA9	342 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ANKRD20A2	Q5SQ80	823 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	HENMT1	Q5T8I9	393 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	MEI1	Q5TIA1	1274 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ANKRD20A1	Q5TYW2	823 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ANKRD20A3	Q5VUR7	823 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ALS2CL	Q60I27	953 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	UNQ6494/PRO21346	Q6UXR6	183 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	FAM181A	Q8N9Y4	354 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	KY	Q8NBH2	561 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	GPR26	Q8NDV2	337 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	TBATA	Q96M53	351 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	VAT1	Q99536	393 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	APOL2	Q9BQE5	337 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	BOC	Q9BWV1	1114 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	GBA3	Q9H227	469 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CARS2	Q9HA77	564 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ZFYVE1	Q9HBF4	777 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	ARFGAP3	Q9NP61	516 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	CNOT6	Q9ULM6	557 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	SUFU	Q9UMX1	484 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PPP2R2C	Q9Y2T4	447 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	PLEKHM1	Q9Y4G2	1056 aa		10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	OAS3	Q9Y6K5	1087 aa	Known RBP	10.79	□□□□□ -0.68
LDHA-215	ENST00000537296	EPG5	Q9HCE0	2579 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	KNTC1	P50748	2209 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	CPED1	A4D0V7	1026 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	DYNC1I1	O14576	645 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	TPP1	O14773	563 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	BUD23	O43709	281 aa	Known RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	AK4	P27144	223 aa	Predicted RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	CETN2	P41208	172 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	GNPDA1	P46926	289 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	BLK	P51451	505 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	ELOC	Q15369	112 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	KCTD19	Q17RG1	926 aa	Predicted RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	PERM1	Q5SV97	790 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	ZNF648	Q5T619	568 aa	Predicted RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	HES3	Q5TGS1	186 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	ADAMTSL4	Q6UY14	1074 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	MICALCL	Q6ZW33	695 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	MARK2	Q7KZI7	788 aa	Known RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	ZNF765	Q7L2R6	523 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	TMC3	Q7Z5M5	1100 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	NRROS	Q86YC3	692 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	NRSN1	Q8IZ57	195 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	TAB3	Q8N5C8	712 aa	Predicted RBP	10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	FAM71D	Q8N9W8	422 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	SLC35B2	Q8TB61	432 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	COX14	Q96I36	57 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	DUSP23	Q9BVJ7	150 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	KCNF1	Q9H3M0	494 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	FAM83D	Q9H4H8	585 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	MAGEE1	Q9HCI5	957 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	BPIFA1	Q9NP55	256 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	GULP1	Q9UBP9	304 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	TRHDE	Q9UKU6	1024 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	DNPEP	Q9ULA0	475 aa		10.78	□□□□□ -0.68
LDHA-215	ENST00000537296	SLC17A4	Q9Y2C5	497 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms