RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 C11orf65Q8NCR3 313 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 TMEM190Q8WZ59 177 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 A0A087X002 238 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 SYNGR3O43761 229 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 TSPAN3O60637 253 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 CTSVO60911 334 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 EGFP01133 1207 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 NOVP48745 357 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 AMPHP49418 695 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 CDH15P55291 814 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 DSCR10P59022 87 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 IRX1P78414 480 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-208ENST00000537047 NFIL3Q16649 462 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 BRAT1Q6PJG6 821 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 ANO5Q75V66 913 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-208ENST00000537047 SLC41A2Q96JW4 573 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 FAM110AQ9BQ89 295 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 CDK19Q9BWU1 502 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 TMEM160Q9NX00 188 aa4.71□□□□□ -1.66
CCDC7-208ENST00000537047 IRAK2O43187 625 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 SEC14L5O43304 696 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 FAM106CPP0CH98 169 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-208ENST00000537047 GAGE5Q13069 117 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 GAGE6Q13070 117 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 TMEM187Q14656 261 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 TMEM35AQ53FP2 167 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 TTI2Q6NXR4 508 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 SUSD1Q6UWL2 747 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 ADSSL1Q8N142 457 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 SCRN2Q96FV2 425 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 QRFPRQ96P65 431 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 NEURL2Q9BR09 285 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 PCGF6Q9BYE7 350 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 PAK5Q9P286 719 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 ERVK-11Q9UQG0 969 aa4.7□□□□□ -1.66
CCDC7-208ENST00000537047 GOLGA6L10A0A0M3HER8 536 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 ZCWPW2A0A1B0GU75 182 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 SNAP23O00161 211 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 VCYO14598 125 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 EIF3DO15371 548 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 GRK6P43250 576 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 TAS2R38P59533 333 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 CSNK2A1P68400 391 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 COG7P83436 770 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 PDCD2Q16342 344 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 TECRLQ5HYJ1 363 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 FBXO47Q5MNV8 452 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 MAP3K21Q5TCX8 1036 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 PQLC2Q6ZP29 291 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 CSNK2A3Q8NEV1 391 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 SLC44A1Q8WWI5 657 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 ART5Q96L15 291 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 MPHOSPH8Q99549 860 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 INTS2Q9H0H0 1204 aaKnown RBP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 BEX4Q9NWD9 120 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-208ENST00000537047 KLHL20Q9Y2M5 609 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 CEPT1Q9Y6K0 416 aa4.69□□□□□ -1.66
CCDC7-208ENST00000537047 IGLV1-44P01699 117 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 ZNF26P17031 533 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-208ENST00000537047 ARCN1P48444 511 aaKnown RBP4.68□□□□□ -1.66
CCDC7-208ENST00000537047 CCR5P51681 352 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 KRT72Q14CN4 511 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 BBS12Q6ZW61 710 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 SLC46A3Q7Z3Q1 461 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 SPAG16Q8N0X2 631 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 RBM15BQ8NDT2 890 aaKnown RBP4.68□□□□□ -1.66
CCDC7-208ENST00000537047 ZNF653Q96CK0 615 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 PYM1Q9BRP8 204 aaKnown RBP4.68□□□□□ -1.66
CCDC7-208ENST00000537047 PDZD7Q9H5P4 517 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 PRSS21Q9Y6M0 314 aa4.68□□□□□ -1.66
CCDC7-208ENST00000537047 TEX13CA0A0J9YWL9 993 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 C5orf60A6NFR6 353 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 MAP2K2P36507 400 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 PGM1P36871 562 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 GPD2P43304 727 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 ARL4CP56559 192 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 CLDN20P56880 219 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 UFM1P61960 85 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 FOXM1Q08050 763 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 SPOCK1Q08629 439 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 ZC2HC1CQ53FD0 456 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-208ENST00000537047 MAP7D3Q8IWC1 876 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 ENAHQ8N8S7 591 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-208ENST00000537047 WDR20Q8TBZ3 569 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 ASCL2Q99929 193 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 BICC1Q9H694 974 aaKnown RBP4.67□□□□□ -1.66
CCDC7-208ENST00000537047 MARCH4Q9P2E8 410 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-208ENST00000537047 POLG2Q9UHN1 485 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 RNF215Q9Y6U7 377 aa4.67□□□□□ -1.66
CCDC7-208ENST00000537047 SPINT2O43291 252 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms