RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 AMBRA1Q9C0C7 1298 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 ZCWPW1Q9H0M4 648 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 ABCG4Q9H172 646 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 CHST8Q9H2A9 424 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 NLRC4Q9NPP4 1024 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 PRDM8Q9NQV8 689 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 CSPG4Q6UVK1 2322 aa6.73□□□□□ -1.33
CCDC60-203ENST00000536742 MYO18AQ92614 2054 aaKnown RBP6.73□□□□□ -1.33
CCDC60-203ENST00000536742 MN1Q10571 1320 aaPredicted RBP6.73□□□□□ -1.33
CCDC60-203ENST00000536742 POM121BA6NF01 834 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 AQP7P3A6NL99 342 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 I3L4J1 428 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 AREL1O15033 823 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 VILLO15195 856 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 MPPED1O15442 326 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ASAP2O43150 1006 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 TLR5O60602 858 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 LIPCP11150 499 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 TSHRP16473 764 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 BRCC3P46736 316 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 STT3AP46977 705 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 CARSP49589 748 aaKnown RBP6.72□□□□□ -1.33
CCDC60-203ENST00000536742 CLCNKBP51801 687 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ARHGEF7Q14155 803 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 SLC29A2Q14542 456 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 PTPRRQ15256 657 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ZNF77Q15935 545 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 TAF12Q16514 161 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 UPP1Q16831 310 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 LACTB2Q53H82 288 aaPredicted RBP6.72□□□□□ -1.33
CCDC60-203ENST00000536742 KIAA1324Q6UXG2 1013 aaKnown RBP6.72□□□□□ -1.33
CCDC60-203ENST00000536742 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 FAM186BQ8IYM0 893 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ACRBPQ8NEB7 543 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 APPL2Q8NEU8 664 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 WDR36Q8NI36 951 aaKnown RBP6.72□□□□□ -1.33
CCDC60-203ENST00000536742 HTR3CQ8WXA8 447 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ZDHHC4Q9NPG8 344 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 CD93Q9NPY3 652 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 SYBUQ9NX95 663 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ZNF212Q9UDV6 495 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 ERRFI1Q9UJM3 462 aaPredicted RBP6.72□□□□□ -1.33
CCDC60-203ENST00000536742 CAPN11Q9UMQ6 739 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 TACC2O95359 2948 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 JMJD1CQ15652 2540 aa6.72□□□□□ -1.33
CCDC60-203ENST00000536742 COL6A5A8TX70 2615 aa6.71□□□□□ -1.33
CCDC60-203ENST00000536742 CCDC151A5D8V7 595 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 TBC1D3BA6NDS4 549 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 KPNA5O15131 536 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 CYTH3O43739 400 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 PEX1O43933 1283 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 RHOBTB3O94955 611 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 GP1BAP07359 652 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 PPP3CBP16298 524 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 CAPN3P20807 821 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 ACVR2AP27037 513 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 IL1R2P27930 398 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 PTGER4P35408 488 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 FOLR3P41439 243 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 MPP3Q13368 585 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 EIF2S3LQ2VIR3 472 aaKnown RBP6.71□□□□□ -1.34
CCDC60-203ENST00000536742 KIAA0895LQ68EN5 471 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 MZT2AQ6P582 158 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 CD300LGQ6UXG3 332 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 RNF44Q7L0R7 432 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 DTX2Q86UW9 622 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 MON1AQ86VX9 555 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 SFTPA1Q8IWL2 248 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 OR2C3Q8N628 320 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 RNF152Q8N8N0 203 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 ARL14EPQ8N8R7 260 aaPredicted RBP6.71□□□□□ -1.34
CCDC60-203ENST00000536742 DEPTORQ8TB45 409 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 PSPC1Q8WXF1 523 aaKnown RBP6.71□□□□□ -1.34
CCDC60-203ENST00000536742 MRPS31Q92665 395 aaKnown RBP6.71□□□□□ -1.34
CCDC60-203ENST00000536742 ERLEC1Q96DZ1 483 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 CPB2Q96IY4 423 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 Q96MF0 132 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 CATSPER2Q96P56 530 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 AIFM2Q9BRQ8 373 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 SELENOOQ9BVL4 669 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 LINC00597Q9H2U6 94 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 NDRG4Q9ULP0 352 aaKnown RBP6.71□□□□□ -1.34
CCDC60-203ENST00000536742 SH2B3Q9UQQ2 575 aa6.71□□□□□ -1.34
CCDC60-203ENST00000536742 DENND4CQ5VZ89 1909 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 A0A1W2PPC4 97 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 TMEM233B4DJY2 109 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 F8W8V4 182 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 YY2O15391 372 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 ESRRBO95718 433 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 FGAP02671 866 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 CD27P26842 260 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 EPHA8P29322 1005 aaPredicted RBP6.7□□□□□ -1.34
CCDC60-203ENST00000536742 LEPRP48357 1165 aaKnown RBP6.7□□□□□ -1.34
CCDC60-203ENST00000536742 TUFMP49411 452 aaKnown RBP6.7□□□□□ -1.34
CCDC60-203ENST00000536742 PDE6CP51160 858 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 TPMTP51580 245 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 SRSF6Q13247 344 aaKnown RBP6.7□□□□□ -1.34
CCDC60-203ENST00000536742 GPR17Q13304 367 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 TGIF1Q15583 401 aa6.7□□□□□ -1.34
CCDC60-203ENST00000536742 SLC35G1Q2M3R5 365 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms