RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SH2D5Q6ZV89 423 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 RSPH3Q86UC2 560 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 FAM124AQ86V42 546 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 RFX6Q8HWS3 928 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 PGAM4Q8N0Y7 254 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 SIX6OS1Q8N1H7 587 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 KCTD6Q8NC69 237 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 MCUQ8NE86 351 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 SHCBP1Q8NEM2 672 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 C1orf162Q8NEQ5 155 aaPredicted RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 CHST13Q8NET6 341 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 OR14C36Q8NHC7 312 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 PNPT1Q8TCS8 783 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 PDCD6IPQ8WUM4 868 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 DEPDC1BQ8WUY9 529 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 POMGNT1Q8WZA1 660 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 FAF2Q96CS3 445 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 CCDC124Q96CT7 223 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 CFAP36Q96G28 342 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 DNAJC1Q96KC8 554 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 TSNARE1Q96NA8 513 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 AGAP3Q96P47 875 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 KLF6Q99612 283 aaPredicted RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 TUBA1CQ9BQE3 449 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 LBHD1Q9BQE6 289 aaPredicted RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 CBWD1Q9BRT8 395 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 LXNQ9BS40 222 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 NAT9Q9BTE0 207 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 SLC13A1Q9BZW2 595 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 TMEM168Q9H0V1 697 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 CYP4F11Q9HBI6 524 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 ANKEF1Q9NU02 776 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 CCM2LQ9NUG4 571 aaPredicted RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 ZNFX1Q9P2E3 1918 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 SLC9A2Q9UBY0 812 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 Q9UFV3 132 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 CDH7Q9ULB5 785 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 ABT1Q9ULW3 272 aaKnown RBP6.63□□□□□ -1.35
USP28-202ENST00000535607 TBX20Q9UMR3 447 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 SLC30A1Q9Y6M5 507 aa6.63□□□□□ -1.35
USP28-202ENST00000535607 IGLV3-22A0A075B6J6 115 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 A0A0B4J269 797 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CCDC195A0A1B0GUA6 201 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 MEI4A8MW99 385 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 PI4K2BG5E9Z4 385 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 H3BNH8 94 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 PDHXO00330 501 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 FBP2O00757 339 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 EXTL3O43909 919 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 KLHL41O60662 606 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CST8O60676 142 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 HSPA4LO95757 839 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 SLC25A27O95847 323 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 HMGCRP04035 888 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 LPLP06858 475 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 ITGAXP20702 1163 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 MMP8P22894 467 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 SFNP31947 248 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 HALP42357 657 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 RECQLP46063 649 aaPredicted RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 QARSP47897 775 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 BCAP31P51572 246 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 HSD17B4P51659 736 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 JAK3P52333 1124 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 SESN2P58004 480 aaPredicted RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 LINC00310P59036 64 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 ABCE1P61221 599 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 MRPS9P82933 396 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 MYBPC1Q00872 1141 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CNTN2Q02246 1040 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 OCA2Q04671 838 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 TRAP1Q12931 704 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 STX5Q13190 355 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CUL2Q13617 745 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 PSMD6Q15008 389 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 EFTUD2Q15029 972 aaKnown RBP eCLIP6.62□□□□□ -1.35
USP28-202ENST00000535607 TCHHL1Q5QJ38 904 aaPredicted RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 C1orf220Q5T0J3 134 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 THOC7Q6I9Y2 204 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 LINC00299Q6ZSB3 139 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 BMP8AQ7Z5Y6 402 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CDKL3Q8IVW4 592 aaPredicted RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 METTL25Q8N6Q8 603 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 RDM1Q8NG50 284 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 OR5AN1Q8NGI8 311 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 ACTL9Q8TC94 416 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 TAS1R2Q8TE23 839 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 CHPT1Q8WUD6 406 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 TRUB1Q8WWH5 349 aaKnown RBP6.62□□□□□ -1.35
USP28-202ENST00000535607 BRI3BPQ8WY22 251 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 KAT5Q92993 513 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 ATP6V0A1Q93050 837 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 SLC35B4Q969S0 331 aa6.62□□□□□ -1.35
USP28-202ENST00000535607 HSPBAP1Q96EW2 488 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms