RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 MAP3K20Q9NYL2 800 aaKnown RBP4.74□□□□□ -1.65
CCDC7-207ENST00000535327 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
CCDC7-207ENST00000535327 PRSS56P0CW18 603 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 ERVK-10P10266 1014 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 ZNF10P21506 573 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-207ENST00000535327 RAD23BP54727 409 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 NAE1Q13564 534 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 ZRSR2Q15696 482 aaKnown RBP4.73□□□□□ -1.65
CCDC7-207ENST00000535327 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 SH3GL2Q99962 352 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 PLEKHA4Q9H4M7 779 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 MYH16Q9H6N6 1097 aa4.73□□□□□ -1.65
CCDC7-207ENST00000535327 PTPRCP08575 1304 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 PRKNO60260 465 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 GNB3P16520 340 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 DDX5P17844 614 aaKnown RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 POLR2CP19387 275 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 CLK1P49759 484 aaKnown RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 TERF1P54274 439 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 EEF1A1P68104 462 aaKnown RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 ZNF766Q5HY98 468 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 EEF1A1P5Q5VTE0 462 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 TRPT1Q86TN4 253 aaKnown RBP4.72□□□□□ -1.65
CCDC7-207ENST00000535327 GTSCR1Q86UQ5 136 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 BEST3Q8N1M1 668 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 SPATA5Q8NB90 893 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 C11orf65Q8NCR3 313 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 TMEM190Q8WZ59 177 aa4.72□□□□□ -1.65
CCDC7-207ENST00000535327 A0A087X002 238 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 SYNGR3O43761 229 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 TSPAN3O60637 253 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 CTSVO60911 334 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 EGFP01133 1207 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 AMPHP49418 695 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 CDH15P55291 814 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 DSCR10P59022 87 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 IRX1P78414 480 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-207ENST00000535327 NFIL3Q16649 462 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 BRAT1Q6PJG6 821 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 ANO5Q75V66 913 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 SMC5Q8IY18 1101 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-207ENST00000535327 SLC41A2Q96JW4 573 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 FAM110AQ9BQ89 295 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 HERPUD2Q9BSE4 406 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 CDK19Q9BWU1 502 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 TMEM160Q9NX00 188 aa4.71□□□□□ -1.66
CCDC7-207ENST00000535327 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 IRAK2O43187 625 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 SEC14L5O43304 696 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 FAM106CPP0CH98 169 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 GRK6P43250 576 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 NOVP48745 357 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-207ENST00000535327 GAGE5Q13069 117 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 GAGE6Q13070 117 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 TMEM187Q14656 261 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 TMEM35AQ53FP2 167 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 TTI2Q6NXR4 508 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 SUSD1Q6UWL2 747 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 ADSSL1Q8N142 457 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 SCRN2Q96FV2 425 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 QRFPRQ96P65 431 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 NEURL2Q9BR09 285 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 PPCSQ9HAB8 311 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 PAK5Q9P286 719 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 ERVK-11Q9UQG0 969 aa4.7□□□□□ -1.66
CCDC7-207ENST00000535327 GOLGA6L10A0A0M3HER8 536 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 ZCWPW2A0A1B0GU75 182 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 SNAP23O00161 211 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 VCYO14598 125 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 EIF3DO15371 548 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC7-207ENST00000535327 NBNO60934 754 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 TAS2R38P59533 333 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 CSNK2A1P68400 391 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-207ENST00000535327 COG7P83436 770 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 TECRLQ5HYJ1 363 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 FBXO47Q5MNV8 452 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 MAP3K21Q5TCX8 1036 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
CCDC7-207ENST00000535327 PQLC2Q6ZP29 291 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 EXOC8Q8IYI6 725 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 ANKRD42Q8N9B4 389 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 CSNK2A3Q8NEV1 391 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 SLC44A1Q8WWI5 657 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 ART5Q96L15 291 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 MPHOSPH8Q99549 860 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 INTS2Q9H0H0 1204 aaKnown RBP4.69□□□□□ -1.66
CCDC7-207ENST00000535327 BEX4Q9NWD9 120 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-207ENST00000535327 KLHL20Q9Y2M5 609 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 CEPT1Q9Y6K0 416 aa4.69□□□□□ -1.66
CCDC7-207ENST00000535327 IGLV1-44P01699 117 aa4.68□□□□□ -1.66
CCDC7-207ENST00000535327 ZNF26P17031 533 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms