RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 AHCTF1Q8WYP5 2266 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 C1orf232A0A0U1RR37 186 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 ZNF487B1APH4 448 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 KCNK1O00180 336 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CLDN7O95471 211 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CPNE6O95741 557 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 PRB1P04280 392 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CD86P42081 329 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 OR1D5P58170 312 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 B4GALNT1Q00973 533 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 PPIDQ08752 370 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CLN3Q13286 438 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 TAF1BQ53T94 588 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 ZNF438Q7Z4V0 828 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 TRIM74Q86UV6 250 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 GALNT13Q8IUC8 556 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 RHOT2Q8IXI1 618 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CCHCR1Q8TD31 782 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 LYSMD1Q96S90 227 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 CHP1Q99653 195 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 RIOK2Q9BVS4 552 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 ADGRE3Q9BY15 652 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 TSPY26PQ9H489 355 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 NHEJ1Q9H9Q4 299 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
CLSTN3-204ENST00000535313 AGRPO00253 132 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 APOL1O14791 398 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 INPP4BO15327 924 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 B4GAT1O43505 415 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 MFAP3LO75121 409 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 ASMTLO95671 621 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 ZFXP17010 805 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 GPR3P46089 330 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 IFI35P80217 286 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 AP1B1Q10567 949 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 LRP8Q14114 963 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 PDK1Q15118 436 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 CLPPQ16740 277 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 PYCR3Q53H96 274 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 CCDC81Q6ZN84 652 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 SLITRK4Q8IW52 837 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 PLD5Q8N7P1 536 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 COX14Q96I36 57 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 AGAP2Q99490 1192 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 MLPHQ9BV36 600 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 RDH14Q9HBH5 336 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 PKD2L2Q9NZM6 624 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 PLEKHM1Q9Y4G2 1056 aa16.09■□□□□ 0.17
CLSTN3-204ENST00000535313 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 ANKRD66B4E2M5 251 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 NVLO15381 856 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 MTA2O94776 668 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 KRT1P04264 644 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 SLC1A1P43005 524 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 SPINT3P49223 89 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 ZBTB17Q13105 803 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 NR1D2Q14995 579 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 QPCTQ16769 361 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 LRRC38Q5VT99 294 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 USP53Q70EK8 1073 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 RFX6Q8HWS3 928 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 NAGSQ8N159 534 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 SNRNP27Q8WVK2 155 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 PATE1Q8WXA2 126 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 CCNL2Q96S94 520 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 SEMA6CQ9H3T2 930 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 FAM83DQ9H4H8 585 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 ZNHIT2Q9UHR6 403 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 ACSL6Q9UKU0 697 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 ST14Q9Y5Y6 855 aa16.08■□□□□ 0.16
CLSTN3-204ENST00000535313 C3orf70A6NLC5 250 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 K7ENP7 123 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 PPP1R12AO14974 1030 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 MMP2P08253 660 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 ITIH1P19827 911 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 MAPK10P53779 464 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 INO80CQ6PI98 192 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 TMPRSS9Q7Z410 1059 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 NT5DC3Q86UY8 548 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 CNTD1Q8N815 330 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 WBP1Q96G27 269 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 NUDT22Q9BRQ3 303 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 BRD8Q9H0E9 1235 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 SEPT10Q9P0V9 454 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 VPS18Q9P253 973 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 GCN1Q92616 2671 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 ATMQ13315 3056 aa16.07■□□□□ 0.16
CLSTN3-204ENST00000535313 PPM1DO15297 605 aa16.06■□□□□ 0.16
CLSTN3-204ENST00000535313 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-204ENST00000535313 TNNT1P13805 278 aa16.06■□□□□ 0.16
CLSTN3-204ENST00000535313 CD1CP29017 333 aa16.06■□□□□ 0.16
CLSTN3-204ENST00000535313 DYNLT1P63172 113 aa16.06■□□□□ 0.16
CLSTN3-204ENST00000535313 GALNT3Q14435 633 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms