RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MASP1P48740 699 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 LSM3P62310 102 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SUZ12Q15022 739 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RFTN2Q52LD8 501 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 CUZD1Q86UP6 607 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 DAW1Q8N136 415 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 AP3S1Q92572 193 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RHOJQ9H4E5 214 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 MDM4O15151 490 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SEC24AO95486 1093 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 TACR2P21452 398 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 ZNF155Q12901 538 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 ITGB3BPQ13352 177 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 PPIGQ13427 754 aaKnown RBP eCLIP18.12■□□□□ 0.492e-7■■□□□ 12
SFSWAP-203ENST00000535236 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 PIH1D2Q8WWB5 315 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 CLCC1Q96S66 551 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 FAM86C2PA6NEL3 165 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 CCDC182A6NF36 153 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 C5orf60A6NFR6 353 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 NR2F6P10588 404 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 PKMP14618 531 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 ADRA1BP35368 520 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 RFX4Q33E94 735 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TAF8Q7Z7C8 310 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 LRRN4CLQ8ND94 238 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 VANGL1Q8TAA9 524 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 PADI3Q9ULW8 664 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TCRBV9S1A1TA0A576 114 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 HAT1O14929 419 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 LYPLA1O75608 230 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 C22orf31O95567 290 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 SPATA31C1P0DKV0 1188 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 GRB14Q14449 540 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 ZNF846Q147U1 533 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 KCTD21Q4G0X4 260 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 BEND5Q7L4P6 421 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 ATCAYQ86WG3 371 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 PHC3Q8NDX5 983 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 B3GNT5Q9BYG0 378 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 SPATA19Q7Z5L4 167 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 HPS6Q86YV9 775 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TMC8Q8IU68 726 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TCF12Q99081 682 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TRMOQ9BU70 441 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 TMEM27Q9HBJ8 222 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 E9PAM4 449 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 FSCN2O14926 492 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 NT5EP21589 574 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 SLC26A3P40879 764 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 CACNG1Q06432 222 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 KCNA10Q16322 511 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 BMT2Q1RMZ1 405 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 HECTD2Q5U5R9 776 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 SRFBP1Q8NEF9 429 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 ZHX1-C8orf76Q96EF9 292 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 LRMDAQ9H2I8 198 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 MAGEL2Q9UJ55 1249 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 IRAK3Q9Y616 596 aa18.11■□□□□ 0.49
SFSWAP-203ENST00000535236 IRGMA1A4Y4 181 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 TMCC2O75069 709 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 SLC5A3P53794 718 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 ELF3P78545 371 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 TIGD2Q4W5G0 525 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 REM2Q8IYK8 340 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 CLHC1Q8NHS4 586 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 LMLNQ96KR4 655 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 DUS2Q9NX74 493 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 XKRYO14609 159 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 CMPK1P30085 196 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 CCT3P49368 545 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 CMC1Q7Z7K0 106 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 APOLD1Q96LR9 279 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 PWWP2AQ96N64 755 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 TRNT1Q96Q11 434 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 FAM192AQ9GZU8 254 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 MTRRQ9UBK8 725 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 PER2O15055 1255 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 B4GALT4O60513 344 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 UNC5CO95185 931 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 QPRTQ15274 297 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 DLG2Q15700 870 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 LCLAT1Q6UWP7 414 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 TSSK3Q96PN8 268 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 SAMD4AQ9UPU9 718 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 DYTNA2CJ06 578 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 DHX15O43143 795 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 RBMXL2O75526 392 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 PIAS1O75925 651 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 RHOQP17081 205 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 ARFIP1P53367 373 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 PTPN5P54829 565 aa18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 INTS6LQ5JSJ4 861 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-203ENST00000535236 B3GNT6Q6ZMB0 384 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms