RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	HNRNPA1L2	Q32P51	320 aa	Known RBP	6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ZACN	Q401N2	412 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	RAB41	Q5JT25	222 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	MPP7	Q5T2T1	576 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ARHGAP40	Q5TG30	622 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	BROX	Q5VW32	411 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	C1QL3	Q5VWW1	255 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	FKBP9P1	Q75LS8	142 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	CHST9	Q7L1S5	443 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	IQCH	Q86VS3	1027 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	SPATS2	Q86XZ4	545 aa	Known RBP	6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ARHGAP18	Q8N392	663 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	KDM1B	Q8NB78	822 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	JAKMIP2	Q96AA8	810 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ZG16B	Q96DA0	208 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	CYFIP2	Q96F07	1278 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	TMX3	Q96JJ7	454 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	LMLN	Q96KR4	655 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	DUSP16	Q9BY84	665 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	LRRC27	Q9C0I9	530 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ASCL3	Q9NQ33	180 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	AASDHPPT	Q9NRN7	309 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	ABCB8	Q9NUT2	735 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	FBXL12	Q9NXK8	326 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	SUN2	Q9UH99	717 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	GGA2	Q9UJY4	613 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	NCKAP1	Q9Y2A7	1128 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	PCDHB1	Q9Y5F3	818 aa		6.24	□□□□□ -1.41
PICALM-223	ENST00000534412	NUMA1	Q14980	2115 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	FLNC	Q14315	2725 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	PRSS38	A1L453	326 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	FAM47DP	A6NHR8	397 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	LRRC72	A6NJI9	287 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	PYCARD-AS1	I3L0S3	204 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412		K7ENP7	123 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	SLC28A2	O43868	658 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	EXOC3	O60645	756 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	SEC24D	O94855	1032 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	GP1BA	P07359	652 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	HMBS	P08397	361 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	GZMK	P49863	264 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	ADPRH	P54922	357 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	ASIC1	P78348	528 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	CST6	Q15828	149 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	SLC45A4	Q5BKX6	768 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	PM20D1	Q6GTS8	502 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	NAPEPLD	Q6IQ20	393 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	INO80C	Q6PI98	192 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	BHLHA9	Q7RTU4	235 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	MRGPRE	Q86SM8	312 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	CXorf67	Q86X51	503 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF557	Q8N988	423 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	WFDC5	Q8TCV5	224 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	KCNE4	Q8WWG9	221 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	TTC17	Q96AE7	1141 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	SERAC1	Q96JX3	654 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	UBXN6	Q9BZV1	441 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	NEUROG2	Q9H2A3	272 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	CUEDC2	Q9H467	287 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	POLR1B	Q9H9Y6	1135 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	HBS1L	Q9Y450	684 aa	Known RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	DMRT1	Q9Y5R6	373 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	SPEN	Q96T58	3664 aa	Known RBP	6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	LRRK2	Q5S007	2527 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	ITIH6	Q6UXX5	1313 aa		6.23	□□□□□ -1.41
PICALM-223	ENST00000534412	TRIM38	O00635	465 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	IKBKB	O14920	756 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	MID1	O15344	667 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	KLK10	O43240	276 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	KDM1A	O60341	852 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	RNASEH1	O60930	286 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	RNASEH2A	O75792	299 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	ABHD16A	O95870	558 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	GIMD1	P0DJR0	217 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	CKMT1A	P12532	417 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	GOT1	P17174	413 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	POLR2E	P19388	210 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	CD70	P32970	193 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	NUDT1	P36639	197 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	HARS2	P49590	506 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	SGSH	P51688	502 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	YWHAG	P61981	247 aa	Known RBP eCLIP	6.22	□□□□□ -1.41	1e-15	■■■□□ 17.8
PICALM-223	ENST00000534412	MRPL49	Q13405	166 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	SLC39A14	Q15043	492 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	RABEP1	Q15276	862 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	SEPT7	Q16181	437 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	KNOP1	Q1ED39	458 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	C1orf220	Q5T0J3	134 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	C9orf64	Q5T6V5	341 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	SPOPL	Q6IQ16	392 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	KDM7A	Q6ZMT4	941 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	UNC13D	Q70J99	1090 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	RSRC2	Q7L4I2	434 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	PIGZ	Q86VD9	579 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	NELFCD	Q8IXH7	590 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	SLC25A45	Q8N413	288 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	AADAT	Q8N5Z0	425 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	OR4C6	Q8NH72	309 aa		6.22	□□□□□ -1.41
PICALM-223	ENST00000534412	GOLGA5	Q8TBA6	731 aa		6.22	□□□□□ -1.41

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