RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 HDAC11Q96DB2 347 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CCDC42Q96M95 316 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ZNF830Q96NB3 372 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 LYSMD1Q96S90 227 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CMKLR1Q99788 373 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 MLPHQ9BV36 600 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 MAK16Q9BXY0 300 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 CDH19Q9H159 772 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 NHEJ1Q9H9Q4 299 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 PISDQ9UG56 409 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 DNPEPQ9ULA0 475 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 LOXL2Q9Y4K0 774 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 HEY1Q9Y5J3 304 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 MYLKQ15746 1914 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 TRBV23OR9-2A0A075B6M9 112 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 C1orf232A0A0U1RR37 186 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CAPN8A6NHC0 703 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 K7ENP7 123 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ERVH48-1M5A8F1 160 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PPM1DO15297 605 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ITIH1P19827 911 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CD1CP29017 333 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CD86P42081 329 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ARHGAP25P42331 645 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 GPR3P46089 330 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PPIDQ08752 370 aaKnown RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 QPCTQ16769 361 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PYCR3Q53H96 274 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 FAM182AQ5T1J6 154 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 INO80CQ6PI98 192 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 ZNF574Q6ZN55 896 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 ZNF438Q7Z4V0 828 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 VSTM4Q8IW00 320 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 PLD5Q8N7P1 536 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CCHCR1Q8TD31 782 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 COX14Q96I36 57 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 OR2M4Q96R27 311 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 CCNL2Q96S94 520 aaPredicted RBP8.86□□□□□ -0.99
COPB1-211ENST00000534234 ADGRE3Q9BY15 652 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 SEMA6CQ9H3T2 930 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 FAM83DQ9H4H8 585 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ABHD10Q9NUJ1 306 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 SPTLC3Q9NUV7 552 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 ZNHIT2Q9UHR6 403 aa8.86□□□□□ -0.99
COPB1-211ENST00000534234 C3orf70A6NLC5 250 aaPredicted RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 ZNF487B1APH4 448 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 APOL1O14791 398 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 EFSO43281 561 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 C1QL1O75973 258 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 ATP1A1P05023 1023 aaKnown RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 MMP2P08253 660 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 ETV5P41161 510 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 SPINT3P49223 89 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 MAPK10P53779 464 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 IFI35P80217 286 aaPredicted RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 CFHR1Q03591 330 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 AP1B1Q10567 949 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 LRP8Q14114 963 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 NR1D2Q14995 579 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 C16orf72Q14CZ0 275 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 PDK1Q15118 436 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 TGIF1Q15583 401 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 ODF2Q5BJF6 829 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 NKAIN2Q5VXU1 208 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 SLC9A4Q6AI14 798 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 CHST15Q7LFX5 561 aaPredicted RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 KDELC2Q7Z4H8 507 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 GALNT13Q8IUC8 556 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 RHOT2Q8IXI1 618 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 USP7Q93009 1102 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 WBP1Q96G27 269 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 AGAP3Q96P47 875 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 WDR24Q96S15 920 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 CEP41Q9BYV8 373 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 PKD2L2Q9NZM6 624 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 AKAP7Q9P0M2 348 aaPredicted RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 ACSL6Q9UKU0 697 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 CNOT6Q9ULM6 557 aaKnown RBP8.85□□□□□ -0.99
COPB1-211ENST00000534234 PRKAB1Q9Y478 270 aa8.85□□□□□ -0.99
COPB1-211ENST00000534234 IGHV1OR21-1A0A087WYE8 117 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 PRAMEF33A0A0G2JMD5 474 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 RGSL1A5PLK6 1076 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 PRAMEF10O60809 474 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 MFAP3LO75121 409 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 MTA2O94776 668 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 TNNT1P13805 278 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 ZFXP17010 805 aaPredicted RBP8.84□□□□□ -0.99
COPB1-211ENST00000534234 LIMK2P53671 638 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 GALNT3Q14435 633 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 CLPPQ16740 277 aaPredicted RBP8.84□□□□□ -0.99
COPB1-211ENST00000534234 TMEM164Q5U3C3 297 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 LRRC38Q5VT99 294 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 NT5DC3Q86UY8 548 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms