RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ZSCAN30Q86W11 494 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 MAP7D3Q8IWC1 876 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 RHOT2Q8IXI1 618 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF567Q8N184 647 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 SLC25A41Q8N5S1 370 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ARL10Q8N8L6 244 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 FATE1Q969F0 183 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 NRSN2Q9GZP1 204 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ABCG4Q9H172 646 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 DPEP2Q9H4A9 486 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 CPNE5Q9HCH3 593 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 SLC23A2Q9UGH3 650 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 DOLKQ9UPQ8 538 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 SLC17A4Q9Y2C5 497 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 KCTD3Q9Y597 815 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 FASNP49327 2511 aaKnown RBP9.58□□□□□ -0.88
SSBP3-215ENST00000533946 AHCTF1Q8WYP5 2266 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 A0A087WV48 116 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 EFSO43281 561 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 DNAJC6O75061 913 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 GP1BAP07359 652 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 PYGMP11217 842 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 HTR1BP28222 390 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 RBL1P28749 1068 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 CSF2RBP32927 897 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ARSDP51689 593 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 EPHB1P54762 984 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 HADHBP55084 474 aaKnown RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 DPTQ07507 201 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ARHGEF7Q14155 803 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 AMZ1Q400G9 498 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 PYCR3Q53H96 274 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TEX44Q53QW1 395 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 CERCAMQ5T4B2 595 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 HENMT1Q5T8I9 393 aaKnown RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TIGD7Q6NT04 549 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ADAMTSL4Q6UY14 1074 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 USP45Q70EL2 814 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 SPRED1Q7Z699 444 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 C17orf82Q86X59 251 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 LRRC49Q8IUZ0 686 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 CCDC50Q8IVM0 306 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 SPACA3Q8IXA5 215 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 FSTL5Q8N475 847 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ARL14Q8N4G2 192 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 LRRC57Q8N9N7 239 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 RCBTB1Q8NDN9 531 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ZDHHC1Q8WTX9 485 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 NXPE2Q96DL1 559 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 MRFAP1L1Q96HT8 127 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 HIC2Q96JB3 615 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TEKT5Q96M29 485 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TBATAQ96M53 351 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 NRTNQ99748 197 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 APOL2Q9BQE5 337 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 NUDT22Q9BRQ3 303 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 MLPHQ9BV36 600 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 SLC25A51Q9H1U9 297 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 LRRN3Q9H3W5 708 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 PHPT1Q9NRX4 125 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 LRIT1Q9P2V4 623 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 ATXN10Q9UBB4 475 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TBC1D29Q9UFV1 150 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 INTUQ9ULD6 942 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 KCNK6Q9Y257 313 aa9.57□□□□□ -0.88
SSBP3-215ENST00000533946 R3HDM2Q9Y2K5 976 aaKnown RBP9.57□□□□□ -0.88
SSBP3-215ENST00000533946 TENM4Q6N022 2769 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF487B1APH4 448 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 D6RAR5 112 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 CCL22O00626 93 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 GAPDHSO14556 408 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TNFRSF10CO14798 259 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A9O60656 530 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 AGTP01019 485 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TPM1P09493 284 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 CCL4P13236 92 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF8P17098 575 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 BPIP17213 487 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A6P19224 532 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 WT1P19544 449 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A1P22309 533 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A4P22310 534 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 CD1CP29017 333 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A3P35503 534 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 UGT1A5P35504 534 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 DUSP3P51452 185 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-215ENST00000533946 WNT3AP56704 352 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TLE3Q04726 772 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 SPARCL1Q14515 664 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 C16orf72Q14CZ0 275 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 PDK1Q15118 436 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 TBC1D25Q3MII6 688 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 PLA2G4EQ3MJ16 856 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 C14orf28Q4W4Y0 310 aa9.56□□□□□ -0.88
SSBP3-215ENST00000533946 HS1BP3Q53T59 392 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms