RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 TMTC1Q8IUR5 882 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 CPXCR1Q8N123 301 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 TNIP2Q8NFZ5 429 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 HMGCLL1Q8TB92 370 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 HERVK_113Q902F9 699 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 PIGTQ969N2 578 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 ELP4Q96EB1 424 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 LINGO1Q96FE5 620 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 MAELQ96JY0 434 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 TFB2MQ9H5Q4 396 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 HINT3Q9NQE9 182 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 TMEM160Q9NX00 188 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 GGA3Q9NZ52 723 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 HSF4Q9ULV5 492 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 RRN3P2A6NIE6 340 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 HHLA1C9JL84 531 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 IFNL4K9M1U5 179 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 ZNHIT1O43257 154 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 CIDEAO60543 219 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 EIF3JO75822 258 aaKnown RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 IGHV4-39P01824 125 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 POLR2CP19387 275 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 NOVP48745 357 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 AMPHP49418 695 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 MMP14P50281 582 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 GNB1P62873 340 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 HIST2H2ACQ16777 129 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 WDR38Q5JTN6 314 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 GGNBP1Q5YKI7 109 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 OR7E24Q6IFN5 339 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 ZNF280DQ6N043 979 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 TTI2Q6NXR4 508 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 METTL2BQ6P1Q9 378 aaKnown RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 TMEM81Q6P7N7 255 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 STXBP4Q6ZWJ1 553 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 GTSCR1Q86UQ5 136 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 APLFQ8IW19 511 aaPredicted RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 PCDH20Q8N6Y1 951 aaKnown RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 C11orf65Q8NCR3 313 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 OR52I2Q8NH67 350 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 ORAI1Q96D31 301 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 METTL2AQ96IZ6 378 aaKnown RBP2.78□□□□□ -1.96
BRCA2-205ENST00000533776 LRR1Q96L50 414 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 ATOH8Q96SQ7 321 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 SH3GL2Q99962 352 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 NEURL2Q9BR09 285 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 PYGO2Q9BRQ0 406 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 DCTN5Q9BTE1 182 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 GPR63Q9BZJ6 419 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 TKTL2Q9H0I9 626 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 C20orf141Q9NUB4 165 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 SAGE1Q9NXZ1 904 aa2.78□□□□□ -1.96
BRCA2-205ENST00000533776 PTPRCP08575 1304 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 SYNGR3O43761 229 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 EGFP01133 1207 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 TFP02787 698 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 URODP06132 367 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 PYGLP06737 847 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 HOXC13P31276 330 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 IRX1P78414 480 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-205ENST00000533776 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.77□□□□□ -1.97
BRCA2-205ENST00000533776 GAGE5Q13069 117 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 GAGE6Q13070 117 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 NAE1Q13564 534 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 RNPS1Q15287 305 aaKnown RBP2.77□□□□□ -1.97
BRCA2-205ENST00000533776 TMEM35AQ53FP2 167 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 QSOX2Q6ZRP7 698 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 SMC5Q8IY18 1101 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 EXOC8Q8IYI6 725 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 HCAR2Q8TDS4 363 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 SLC38A5Q8WUX1 472 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 SCRN2Q96FV2 425 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 QRFPRQ96P65 431 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 ASCL2Q99929 193 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 BEX4Q9NWD9 120 aaPredicted RBP2.77□□□□□ -1.97
BRCA2-205ENST00000533776 OGFRQ9NZT2 677 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 HSPB7Q9UBY9 170 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 CNOT7Q9UIV1 285 aaKnown RBP2.77□□□□□ -1.97
BRCA2-205ENST00000533776 ACSL5Q9ULC5 683 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 PADI3Q9ULW8 664 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 ERVK-11Q9UQG0 969 aa2.77□□□□□ -1.97
BRCA2-205ENST00000533776 ARID4BQ4LE39 1312 aaPredicted RBP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 GOLGA6L10A0A0M3HER8 536 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 CTAGE9A4FU28 777 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 TEX22C9J3V5 150 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 NR5A2O00482 541 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 NCAM2O15394 837 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 PRKNO60260 465 aaPredicted RBP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 CAVIN2O95810 425 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 HNRNPA1P09651 372 aaKnown RBP eCLIP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 IFIT1P09914 478 aaKnown RBP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 CTAGE8P0CG41 777 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 FAM106CPP0CH98 169 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 PRSS56P0CW18 603 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 PSMC2P35998 433 aaKnown RBP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 GGT5P36269 586 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 GPD2P43304 727 aa2.76□□□□□ -1.97
BRCA2-205ENST00000533776 LUMP51884 338 aaPredicted RBP2.76□□□□□ -1.97
BRCA2-205ENST00000533776 CDH15P55291 814 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms