RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PLPP4Q5VZY2 271 aa28.33■■■□□ 2.13
SAMD1-202ENST00000533683 CMTM8Q8IZV2 173 aa28.33■■■□□ 2.13
SAMD1-202ENST00000533683 CATSPER2Q96P56 530 aa28.33■■■□□ 2.13
SAMD1-202ENST00000533683 PFDN6O15212 129 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 GPR39O43194 453 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 SKAP2O75563 359 aaPredicted RBP28.33■■■□□ 2.12
SAMD1-202ENST00000533683 PFKLP17858 780 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 BTKQ06187 659 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 BCL2L1Q07817 233 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 CTSL3PQ5NE16 218 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 PTGR2Q8N8N7 351 aaPredicted RBP28.33■■■□□ 2.12
SAMD1-202ENST00000533683 MRPL43Q8N983 215 aaKnown RBP28.33■■■□□ 2.12
SAMD1-202ENST00000533683 SHKBP1Q8TBC3 707 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 KIAA1191Q96A73 305 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 SLC30A3Q99726 388 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 TNKS2Q9H2K2 1166 aa28.33■■■□□ 2.12
SAMD1-202ENST00000533683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.32■■■□□ 2.12
SAMD1-202ENST00000533683 HTRA2O43464 458 aaPredicted RBP28.32■■■□□ 2.12
SAMD1-202ENST00000533683 TSPAN8P19075 237 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 CSNK1DP48730 415 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 RAD51Q06609 339 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 CUL3Q13618 768 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 NET1Q7Z628 596 aaPredicted RBP28.32■■■□□ 2.12
SAMD1-202ENST00000533683 TCEAL4Q96EI5 215 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 IKZF3Q9UKT9 509 aa28.32■■■□□ 2.12
SAMD1-202ENST00000533683 NIPSNAP2O75323 286 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 ITGAXP20702 1163 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 PPIGQ13427 754 aaKnown RBP eCLIP28.31■■■□□ 2.123e-25■■■□□ 18
SAMD1-202ENST00000533683 AARS2Q5JTZ9 985 aaKnown RBP28.31■■■□□ 2.12
SAMD1-202ENST00000533683 DGKKQ5KSL6 1271 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 TAS2R42Q7RTR8 314 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 BADQ92934 168 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 LMLNQ96KR4 655 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 RPL10LQ96L21 214 aaKnown RBP28.31■■■□□ 2.12
SAMD1-202ENST00000533683 HELZP42694 1942 aaKnown RBP28.31■■■□□ 2.12
SAMD1-202ENST00000533683 MTCL1Q9Y4B5 1905 aaKnown RBP28.31■■■□□ 2.12
SAMD1-202ENST00000533683 SLC22A2O15244 555 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 KRT36O76013 467 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 PYGLP06737 847 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 CLCN4P51793 760 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 C1QTNF8P60827 252 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 SATB1Q01826 763 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 PFKFB4Q16877 469 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 AFAP1L2Q8N4X5 818 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 CEP70Q8NHQ1 597 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 RIN3Q8TB24 985 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 MARK4Q96L34 752 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 RTKNQ9BST9 563 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 TRAF6Q9Y4K3 522 aa28.31■■■□□ 2.12
SAMD1-202ENST00000533683 RGSL1A5PLK6 1076 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 KERAO60938 352 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 VPS26AO75436 327 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 RFPL2O75678 378 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CIB2O75838 187 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 SIX3O95343 332 aaPredicted RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CYBBP04839 570 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 THRAP10827 490 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CTSOP43234 321 aaPredicted RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 RPL26P61254 145 aaKnown RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 STAG3L4Q8TBR4 150 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 PANX3Q96QZ0 392 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 RAD9AQ99638 391 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 MEAF6Q9HAF1 191 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 C15orf41Q9Y2V0 281 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 MYOFQ9NZM1 2061 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 A0A0J9YYE9 177 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 TRBC1P01850 177 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 ADSLP30566 484 aaPredicted RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 BMPR1AP36894 532 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 MAPK8P45983 427 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CDH13P55290 713 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 ATP6V0D1P61421 351 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CACNG1Q06432 222 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 TRMT5Q32P41 509 aaKnown RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 SIDT2Q8NBJ9 832 aaKnown RBP28.3■■■□□ 2.12
SAMD1-202ENST00000533683 KCNV2Q8TDN2 545 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 ACTRT2Q8TDY3 377 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 PDE4DIPQ5VU43 2346 aa28.3■■■□□ 2.12
SAMD1-202ENST00000533683 CCDC189A1A4V9 331 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 LRRC14BA6NHZ5 514 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 PSMG1O95456 288 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 CD9P21926 228 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 HLA-FP30511 346 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 CTNNB1P35222 781 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 PTGER3P43115 390 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 PITRM1Q5JRX3 1037 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 FAM219BQ5XKK7 198 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 RIPOR1Q6ZS17 1223 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 METTL3Q86U44 580 aaKnown RBP28.29■■■□□ 2.12
SAMD1-202ENST00000533683 SNX32Q86XE0 403 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 NKAPQ8N5F7 415 aaKnown RBP28.29■■■□□ 2.12
SAMD1-202ENST00000533683 SP7Q8TDD2 431 aaPredicted RBP28.29■■■□□ 2.12
SAMD1-202ENST00000533683 TACO1Q9BSH4 297 aaKnown RBP28.29■■■□□ 2.12
SAMD1-202ENST00000533683 RNF112Q9ULX5 631 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 LZTS1Q9Y250 596 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 COPG1Q9Y678 874 aaKnown RBP28.29■■■□□ 2.12
SAMD1-202ENST00000533683 SLC30A1Q9Y6M5 507 aa28.29■■■□□ 2.12
SAMD1-202ENST00000533683 SOCS5O75159 536 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 IGSF6O95976 241 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 STK19P49842 368 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms