RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 GSNP06396 782 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 SERPINA4P29622 427 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 RAD23AP54725 363 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 ABRQ12979 859 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 PHACTR4Q8IZ21 702 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 NIPA2Q8N8Q9 360 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 EVLQ9UI08 416 aaPredicted RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 MYRFQ9Y2G1 1151 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 ASB3Q9Y575 518 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 AP4B1Q9Y6B7 739 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 ABCC6O95255 1503 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 TMEM233B4DJY2 109 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 TBX10O75333 385 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 OR6B1O95007 311 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 IDO1P14902 403 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 GABRR2P28476 465 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 CHN2P52757 468 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 KLF1Q13351 362 aaPredicted RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 IKBKEQ14164 716 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 PON2Q15165 354 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 TP53INP2Q8IXH6 220 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 PQLC1Q8N2U9 271 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 PQLC3Q8N755 202 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 BTN2A3PQ96KV6 586 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 TTPALQ9BTX7 342 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 BBS2Q9BXC9 721 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 NMUR1Q9HB89 426 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 ARHGEF3Q9NR81 526 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 EMC3Q9P0I2 261 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 C5P01031 1676 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 WFS1O76024 890 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 PEX2P28328 305 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 ALDH6A1Q02252 535 aaKnown RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 PRKG2Q13237 762 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 SUZ12Q15022 739 aaKnown RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 LRRC73Q5JTD7 316 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 CDHR3Q6ZTQ4 885 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 NKAPQ8N5F7 415 aaKnown RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 TOR1AIP2Q8NFQ8 470 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 EMILIN2Q9BXX0 1053 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.46
BDNF-218ENST00000533246 CDH22Q9UJ99 828 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 ANAPC2Q9UJX6 822 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 SLC12A4Q9UP95 1085 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 TEX264Q9Y6I9 313 aa12.21□□□□□ -0.46
BDNF-218ENST00000533246 COL1A2P08123 1366 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 A0A0J9YYE9 177 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 MEIS3P2A8K0S8 358 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 STX16-NPEPL1H3BU86 382 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 GGT5P36269 586 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 IDH3AP50213 366 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SLC10A7Q0GE19 358 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 GPRIN3Q6ZVF9 776 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ANKS3Q6ZW76 656 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ITIH5Q86UX2 942 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SYT12Q8IV01 421 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 KBTBD2Q8IY47 623 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SLC2A6Q9UGQ3 507 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 A0A1W2PQ67 120 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 UBXN8O00124 270 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 CORO1AP31146 461 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 SERPINB10P48595 397 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 IDH2P48735 452 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 TTPAP49638 278 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 PLCL1Q15111 1095 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 DEPDC1Q5TB30 811 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SPPL2CQ8IUH8 684 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ELMOD2Q8IZ81 293 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ELMO1Q92556 727 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 LPGAT1Q92604 370 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 MYOCQ99972 504 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ACBD6Q9BR61 282 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 TBCCD1Q9NVR7 557 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SLC7A8Q9UHI5 535 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 NPEPPSL1A6NEC2 478 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 TRIM38O00635 465 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 APOA1P02647 267 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 OR56A5P0C7T3 313 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 NR4A1P22736 598 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 S100A5P33763 92 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 SLC9B1Q4ZJI4 515 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 C2orf73Q8N5S3 287 aaPredicted RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 OR13C4Q8NGS5 318 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 FNDC8Q8TC99 324 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 TNKS2Q9H2K2 1166 aa12.2□□□□□ -0.46
BDNF-218ENST00000533246 ZMAT5Q9UDW3 170 aaKnown RBP12.2□□□□□ -0.46
BDNF-218ENST00000533246 STYXL1Q9Y6J8 313 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms