RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PTP4A2Q12974 167 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 RFTN1Q14699 578 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CLEC16AQ2KHT3 1053 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 ERMARDQ5T6L9 678 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 C6orf15Q6UXA7 325 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CLEC18BQ6UXF7 455 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 ARHGAP22Q7Z5H3 698 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TMEM135Q86UB9 458 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 NDUFAF2Q8N183 169 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 BBS5Q8N3I7 341 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 BMPERQ8N8U9 685 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CLEC18CQ8NCF0 446 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 GALNT6Q8NCL4 622 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 C3orf20Q8ND61 904 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 SCAMP4Q969E2 229 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 SH3KBP1Q96B97 665 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 SMIM14Q96QK8 99 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 KCTD15Q96SI1 283 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TBC1D10AQ9BXI6 508 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 SPRY4Q9C004 299 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TWSG1Q9GZX9 223 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 ABCG8Q9H221 673 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 NOD2Q9HC29 1040 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CASS4Q9NQ75 786 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CROTQ9UKG9 612 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 KCNK6Q9Y257 313 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 SLC17A4Q9Y2C5 497 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 BSNQ9UPA5 3926 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 A0A1W2PQ67 120 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 NPIPB15A6NHN6 443 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-206ENST00000531430 ENO4A6NNW6 628 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 RASSF9O75901 435 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 FURINP09958 794 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 ACP5P13686 325 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 ZNF28P17035 718 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 AMD1P17707 334 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 LHCGRP22888 699 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 COL8A1P27658 744 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 EPHB1P54762 984 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 AIF1P55008 147 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TCP11X2Q5H9J9 407 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 FKBP15Q5T1M5 1219 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 ARMC12Q5T9G4 340 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TMCO4Q5TGY1 634 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TCTN3Q6NUS6 607 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-206ENST00000531430 RFX8Q6ZV50 586 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 USP45Q70EL2 814 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 PHF13Q86YI8 300 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-206ENST00000531430 ARHGAP12Q8IWW6 846 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 CPT1CQ8TCG5 803 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 STAMBPL1Q96FJ0 436 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 SCRN2Q96FV2 425 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TGM7Q96PF1 710 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 PSKH2Q96QS6 385 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 OR6C1Q96RD1 312 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 AGAP2Q99490 1192 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 AGPAT1Q99943 283 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 RIOK2Q9BVS4 552 aaKnown RBP9.17□□□□□ -0.94
NEDD8-206ENST00000531430 PDP2Q9P2J9 529 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 POLHQ9Y253 713 aa9.17□□□□□ -0.94
NEDD8-206ENST00000531430 TMEM184BQ9Y519 407 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-206ENST00000531430 A6NCN8 305 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 RFPL1O75677 317 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 DNAJB5O75953 348 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 RNF8O76064 485 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 KIAA0754O94854 1291 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 AMPD1P23109 780 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 CASP14P31944 242 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 HTR7P34969 479 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 STAT5AP42229 794 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 FASLGP48023 281 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 CD97P48960 835 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 CCL11P51671 97 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 SH3BP2P78314 561 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 OGDHQ02218 1023 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 TRAF2Q12933 501 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 EIF2S3LQ2VIR3 472 aaKnown RBP9.16□□□□□ -0.94
NEDD8-206ENST00000531430 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-206ENST00000531430 IYDQ6PHW0 289 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 TECPR1Q7Z6L1 1165 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 PLXDC1Q8IUK5 500 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 SFRP1Q8N474 314 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 TTC30BQ8N4P2 665 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 NPWQ8N729 165 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 NEK11Q8NG66 645 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 EXD1Q8NHP7 514 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 PRR7Q8TB68 274 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 SSC4DQ8WTU2 575 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 NUDCD1Q96RS6 583 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 SNRNP25Q9BV90 132 aaKnown RBP9.16□□□□□ -0.94
NEDD8-206ENST00000531430 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms