RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PRLP01236 227 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 ALDOCP09972 364 aaKnown RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 HSPA8P11142 646 aaKnown RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 TSPAN8P19075 237 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 TCN1P20061 433 aaPredicted RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 RGRP47804 291 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 CLCQ05315 142 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 USP41Q3LFD5 358 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 COQ5Q5HYK3 327 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 ADGRF1Q5T601 910 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 ANKS6Q68DC2 871 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PAQR3Q6TCH7 311 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 TAS1R1Q7RTX1 841 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 EFL1Q7Z2Z2 1120 aaKnown RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 LILRA2Q8N149 483 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 LRRC43Q8N309 656 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PHC3Q8NDX5 983 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 C3orf30Q96M34 536 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PFDN4Q9NQP4 134 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 MED16Q9Y2X0 877 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 NDUFAF1Q9Y375 327 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 TXNDC9O14530 226 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 KLK8O60259 260 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 STC2O76061 302 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 SIX3O95343 332 aaPredicted RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 GJB5O95377 273 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 STAMBPO95630 424 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 FMO4P31512 558 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 CLCN4P51793 760 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 GRIK2Q13002 908 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 CYTH1Q15438 398 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 KIF19Q2TAC6 998 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 AARS2Q5JTZ9 985 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 FUNDC1Q8IVP5 155 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 MIER2Q8N344 545 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 TMEM102Q8N9M5 508 aaPredicted RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 TSPEARQ8WU66 669 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 MYRFLQ96LU7 910 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 PKP2Q99959 881 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 TRPM5Q9NZQ8 1165 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 AP4S1Q9Y587 144 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 PRORSD1PA6NEY8 169 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 TBKBP1A7MCY6 615 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 SUPT3HB4E1H0 165 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 H7C0S8 307 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 PIP5K1BO14986 540 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 DNAJA2O60884 412 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 VPS26AO75436 327 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 SUPT3HO75486 399 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 EFEMP2O95967 443 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 GNRH1P01148 92 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 F11P03951 625 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 RPS17P08708 135 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 LBPP18428 481 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 CORO1AP31146 461 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 MRPL19P49406 292 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 SPATS1Q496A3 300 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 PABPC1LQ4VXU2 614 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 SETMARQ53H47 684 aaPredicted RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 FOXB2Q5VYV0 432 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 FBXL19Q6PCT2 694 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 PHYKPLQ8IUZ5 450 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 EFHD1Q9BUP0 239 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 NUSAP1Q9BXS6 441 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
BRCA2-204ENST00000530893 FAM50BQ9Y247 325 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 RAI2Q9Y5P3 530 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
BRCA2-204ENST00000530893 A0A0J9YYE9 177 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 TCRBV3S1A0A5B6 114 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 MLYCDO95822 493 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 KLKB1P03952 638 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 PKMP14618 531 aaKnown RBP17.12■□□□□ 0.33
BRCA2-204ENST00000530893 IDO1P14902 403 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 ARSAP15289 507 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 EEF1DP29692 281 aaKnown RBP17.12■□□□□ 0.33
BRCA2-204ENST00000530893 PEX19P40855 299 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 TLR1Q15399 786 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 LIN52Q52LA3 116 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 OGFOD2Q6N063 350 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 FAM126BQ8IXS8 530 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 FAM156AQ8NDB6 213 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 TRPC4APQ8TEL6 797 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 PBXIP1Q96AQ6 731 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 NSMCE3Q96MG7 304 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 BIRC8Q96P09 236 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 CFHR5Q9BXR6 569 aa17.12■□□□□ 0.33
BRCA2-204ENST00000530893 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
BRCA2-204ENST00000530893 SDR39U1Q9NRG7 319 aaPredicted RBP17.12■□□□□ 0.33
BRCA2-204ENST00000530893 C15orf38-AP3S2A0A0A6YYH1 394 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms