RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NPAS2Q99743 824 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D10AQ9BXI6 508 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 LMAN2LQ9H0V9 348 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 SLC17A7Q9P2U7 560 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 CHKBQ9Y259 395 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 PLLPQ9Y342 182 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 SAMHD1Q9Y3Z3 626 aaKnown RBP8.46□□□□□ -1.06
CTNND1-227ENST00000530748 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.06
CTNND1-227ENST00000530748 PER2O15055 1255 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SEPT4O43236 478 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 KRT36O76013 467 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TRBC1P01850 177 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 FGBP02675 491 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PTPN9P43378 593 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 USP46P62068 366 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 KCNA10Q16322 511 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ERICH5Q6P6B1 374 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 GK5Q6ZS86 529 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PACS2Q86VP3 889 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 JAZF1Q86VZ6 243 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SMYD1Q8NB12 490 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 RHOBTB2Q9BYZ6 727 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 HBS1LQ9Y450 684 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NID2Q14112 1375 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 FPGTO14772 594 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CCNE2O96020 404 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ZBTB48P10074 688 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 RAPSNQ13702 412 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NDUFA9Q16795 377 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 REP15Q6BDI9 236 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CCDC185Q8N715 623 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SLC4A11Q8NBS3 891 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 INPP4AQ96PE3 977 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PIGUQ9H490 435 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 GOLGA2P5Q9HBQ8 144 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 EXD2Q9NVH0 621 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF541Q9H0D2 1346 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3DA0A087WVF3 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3IA0A087WXS9 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3EA0A087X179 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3KA0A087X1G2 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3FA6NER0 549 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3LB9A6J9 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 BTBD19C9JJ37 291 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3HP0C7X1 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 HNF4AP41235 474 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 GCNT6Q5T4J0 391 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3GQ6DHY5 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3CQ6IPX1 549 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CRELD2Q6UXH1 353 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D3Q8IZP1 549 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 WDR60Q8WVS4 1066 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 RAD51AP1Q96B01 352 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PLEKHG4BQ96PX9 1271 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CPXM1Q96SM3 734 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ERVK-5Q9HDB9 667 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PHPT1Q9NRX4 125 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF446Q9NWS9 450 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TCAF1Q9Y4C2 921 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 COL14A1Q05707 1796 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ABHD14A-ACY1A0A1B0GW23 586 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 H3BNH8 94 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 MDM4O15151 490 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 DHX15O43143 795 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 IPO13O94829 963 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 AP2A1O95782 977 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 MPSTP25325 297 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TRIM32Q13049 653 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CPSF6Q16630 551 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CCNYL2Q5T2Q4 361 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SLC25A24Q6NUK1 477 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 OAFQ86UD1 273 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 OR6K2Q8NGY2 324 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF563Q8TA94 476 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ACBD6Q9BR61 282 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 B3GNT5Q9BYG0 378 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ABCG8Q9H221 673 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 LRTM1Q9HBL6 345 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 LRRC4CQ9HCJ2 640 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 SSR3Q9UNL2 185 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 MRPS33Q9Y291 106 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ARL5CA6NH57 179 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 EDF1O60869 148 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ERAL1O75616 437 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 OGNP20774 298 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ITPKAP23677 461 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PRDX6P30041 224 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 GPD2P43304 727 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CLCNKBP51801 687 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NR1H2P55055 460 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 EVX2Q03828 476 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 ACAP2Q15057 778 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms