RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TAF4O00268 1085 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TCEA3O75764 348 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 RBP3P10745 1247 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 PNLIPP16233 465 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 RBL1P28749 1068 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 WNT3AP56704 352 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 CLDN6P56747 220 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 DCDC1P59894 354 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 OTUD4Q01804 1114 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 CYP4F3Q08477 520 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 ILF3Q12906 894 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 PERM1Q5SV97 790 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 FAM182AQ5T1J6 154 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 PDPK2PQ6A1A2 396 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TTC13Q8NBP0 860 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 MDM1Q8TC05 714 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 EID2BQ96D98 161 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 NXPE2Q96DL1 559 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 HES6Q96HZ4 224 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TRABDQ9H4I3 376 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 RMI1Q9H9A7 625 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 VPS18Q9P253 973 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 TRIM10Q9UDY6 481 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 CNOT6Q9ULM6 557 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
TRAPPC4-209ENST00000528230 UNC13CQ8NB66 2214 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 AKAP13Q12802 2813 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 A0A0U1RQJ8 604 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 GOLGA6L9A6NEM1 432 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 SRRM3A6NNA2 597 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 DDX3YO15523 660 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 KRT86O43790 486 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 NOBOXO60393 691 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 ANXA9O76027 345 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 GLB1P16278 677 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 HLA-DPA1P20036 260 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 HMGCLP35914 325 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 ADCY8P40145 1251 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 GNPDA1P46926 289 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 POLD2P49005 469 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 LRP8Q14114 963 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 PYCR3Q53H96 274 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 ZNF662Q6ZS27 426 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 C17orf82Q86X59 251 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 NRROSQ86YC3 692 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 KYQ8NBH2 561 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 DTX3LQ8TDB6 740 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 PPP1R2P1Q96PQ5 205 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 CCDC3Q9BQI4 270 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 ZSCAN5AQ9BUG6 496 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 GBA3Q9H227 469 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 DPEP2Q9H4A9 486 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 UBP1Q9NZI7 540 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 HACD3Q9P035 362 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 RSPH14Q9UHP6 348 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 APPL1Q9UKG1 709 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 SHOC2Q9UQ13 582 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 TMEM98Q9Y2Y6 226 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 SPEGQ15772 3267 aa12.03□□□□□ -0.48
TRAPPC4-209ENST00000528230 FADS2P1A8MWK0 482 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 GPR89AB7ZAQ6 455 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 NTN3O00634 580 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 INPP4BO15327 924 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 NUDT21O43809 227 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 CSO75390 466 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 FTCDO95954 541 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 FGF1P05230 155 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 PIRTP0C851 137 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 GPR89BP0CG08 455 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 GEMP55040 296 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 CTBSQ01459 385 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 HLTFQ14527 1009 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 TCEA2Q15560 299 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC1A5Q15758 541 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 ISXQ2M1V0 245 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 SIRPB2Q5JXA9 342 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 CERCAMQ5T4B2 595 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZDHHC20Q5W0Z9 365 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 AADACL2Q6P093 401 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 DARS2Q6PI48 645 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 DOK6Q6PKX4 331 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 RBM44Q6ZP01 1051 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms