RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ASCC3Q8N3C0 2202 aaKnown RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 DNAH14Q0VDD8 3507 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 MROH6A6NGR9 719 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 FADS2P1A8MWK0 482 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 AP3B1O00203 1094 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 CSF2P04141 144 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 MYCLP1P12525 358 aaPredicted RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 IVDP26440 423 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 HTR1BP28222 390 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ARRB1P49407 418 aaPredicted RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ENPP7Q6UWV6 458 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 PARGQ86W56 976 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 JAMLQ86YT9 394 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 NETO1Q8TDF5 533 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 WDR92Q96MX6 357 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 SPATA16Q9BXB7 569 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 ASIC3Q9UHC3 531 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 KLF15Q9UIH9 416 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 PNMA8BQ9ULN7 279 aaPredicted RBP12.86□□□□□ -0.35
SMPD1-202ENST00000526280 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
SMPD1-202ENST00000526280 DMXL1Q9Y485 3027 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 TMEM202A6NGA9 273 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 GAPDHSO14556 408 aaPredicted RBP12.85□□□□□ -0.35
SMPD1-202ENST00000526280 TNFRSF10CO14798 259 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 YKT6O15498 198 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 TTI1O43156 1089 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 PCDHGA12O60330 932 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 TMEM63AO94886 807 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 NME1P15531 152 aaKnown RBP12.85□□□□□ -0.35
SMPD1-202ENST00000526280 KELP23276 732 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 ADRA1DP25100 572 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 PSMA3P25788 255 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 SPAM1P38567 509 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 NPY2RP49146 381 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 CCT8P50990 548 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
SMPD1-202ENST00000526280 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 SLC14A1Q13336 389 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 LAMB3Q13751 1172 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 ZNF542PQ5EBM4 170 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 RNASEH2BQ5TBB1 312 aaKnown RBP12.85□□□□□ -0.35
SMPD1-202ENST00000526280 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 ZNF534Q76KX8 674 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 MCUQ8NE86 351 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 OR56A4Q8NGH8 313 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 OR13C4Q8NGS5 318 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 COX14Q96I36 57 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 RANBP9Q96S59 729 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 CAAP1Q9H8G2 361 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 PCDHGB2Q9Y5G2 931 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
SMPD1-202ENST00000526280 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 GLYATL1P3A0A0U1RQE8 302 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 HEATR9A2RTY3 570 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 DNALI1O14645 258 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 INPP4BO15327 924 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 CEACAM5P06731 702 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 MLNP12872 115 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 CD59P13987 128 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 HADHAP40939 763 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SESN2P58004 480 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 HNRNPKP61978 463 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 IL9RQ01113 521 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 PPARDQ03181 441 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 BNIP3Q12983 259 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SEPT6Q14141 434 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 NAA30Q147X3 362 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 CHRNA6Q15825 494 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SKIDA1Q1XH10 827 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 ALG11Q2TAA5 492 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 UAP1L1Q3KQV9 507 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 CCDC38Q502W7 563 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 MAATS1Q7Z4T9 603 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 PCGF5Q86SE9 256 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 CAND1Q86VP6 1230 aaKnown RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SAP25Q8TEE9 199 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 STYXQ8WUJ0 223 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 BTN2A2Q8WVV5 523 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 TSACCQ96A04 125 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 DNAJC1Q96KC8 554 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms