RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ISG20Q96AZ6 181 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 TMA16Q96EY4 203 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 IFT43Q96FT9 208 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 TSPAN17Q96FV3 270 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 FCRL3Q96P31 734 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 NUDCD1Q96RS6 583 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 TRIB3Q96RU7 358 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 TCF12Q99081 682 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 FICDQ9BVA6 458 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CINPQ9BW66 212 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 ADGRE3Q9BY15 652 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CIPCQ9C0C6 399 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 MTG2Q9H4K7 406 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 MANSC1Q9H8J5 431 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CHRAC1Q9NRG0 131 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 C20orf96Q9NUD7 363 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 FGFR1OP2Q9NVK5 253 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 FBXO10Q9UK96 956 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 RAB23Q9ULC3 237 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 PHTF1Q9UMS5 762 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 OR51B4Q9Y5P0 310 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 USH1CQ9Y6N9 552 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 ADAMTS9Q9P2N4 1935 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 SPAG17Q6Q759 2223 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CKAP5Q14008 2032 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 NUP205Q92621 2012 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ZFHX2Q9C0A1 2572 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 A0A087X1B8 175 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 A0A1W2PQF6 199 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CCT8L1PA6NM43 557 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 H7C0S8 307 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TPP1O14773 563 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 PFDN6O15212 129 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 INSIG1O15503 277 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ATP9BO43861 1147 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 PLIN3O60664 434 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 USP12O75317 370 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 SNNO75324 88 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 SPAG7O75391 227 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 PMPCBO75439 489 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ZMPSTE24O75844 475 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ATP5HO75947 161 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FSBPO95073 299 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CRTAMO95727 393 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 AVPP01185 164 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 BPGMP07738 259 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TYK2P29597 1187 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 NTSR1P30989 418 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 HOXA6P31267 233 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FOXN2P32314 431 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CD86P42081 329 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CD151P48509 253 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 NAA20P61599 178 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CRADDP78560 199 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ASPHQ12797 758 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 LMAN2Q12907 356 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MTM1Q13496 603 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 THOC5Q13769 683 aaKnown RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 PDE1CQ14123 709 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 ZNF234Q14588 700 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 GRM3Q14832 879 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FUT11Q495W5 492 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TAF1BQ53T94 588 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 HSP90AA5PQ58FG0 334 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FSCBQ5H9T9 825 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 MROH9Q5TGP6 573 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MRNIPQ6NTE8 343 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ARMCX6Q7L4S7 300 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TRPM8Q7Z2W7 1104 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MFN1Q8IWA4 741 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 HOMEZQ8IX15 550 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 OTUD6BQ8N6M0 293 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FIBINQ8TAL6 211 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MGARPQ8TDB4 240 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 STYXQ8WUJ0 223 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 CCT6BQ92526 530 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 PTPRN2Q92932 1015 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ZBTB9Q96C00 473 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MFSD3Q96ES6 412 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 VPS39Q96JC1 886 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TSNARE1Q96NA8 513 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 FAM111AQ96PZ2 611 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 SEMA3CQ99985 751 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 TDRD1Q9BXT4 1180 aaKnown RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 TRIM55Q9BYV6 548 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 SLC2A11Q9BYW1 496 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 ARRDC1-AS1Q9H2J1 176 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 POLMQ9NP87 494 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 SNX15Q9NRS6 342 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MRGBPQ9NV56 204 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 INTS10Q9NVR2 710 aaKnown RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 ELOVL2Q9NXB9 296 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 MBD1Q9UIS9 605 aaPredicted RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 GMEB2Q9UKD1 530 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 RRP15Q9Y3B9 282 aaKnown RBP7.07□□□□□ -1.28
VPS11-201ENST00000524454 MAP4K5Q9Y4K4 846 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 STON1Q9Y6Q2 735 aa7.07□□□□□ -1.28
VPS11-201ENST00000524454 SHROOM3Q8TF72 1996 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms