RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PIH1D2Q8WWB5 315 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 SCAMP4Q969E2 229 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 AP2M1Q96CW1 435 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 EFHD1Q9BUP0 239 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 APMAPQ9HDC9 416 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 FANCLQ9NW38 375 aa22.59■■□□□ 1.21
PVT1-218ENST00000523328 TMEM191CA6NGB0 347 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 LGALS16A8MUM7 142 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 MAFKO60675 156 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 RNF8O76064 485 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 MAP3K6O95382 1288 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 CTPS1P17812 591 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 DEFB109BQ30KR1 87 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 RALGPS1Q5JS13 557 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 USP45Q70EL2 814 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 STARD8Q92502 1023 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 COX14Q96I36 57 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 SMIM14Q96QK8 99 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 AGAP2Q99490 1192 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 ZPBPQ9BS86 351 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 ETNK2Q9NVF9 386 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 PLAAQ9Y263 795 aa22.58■■□□□ 1.21
PVT1-218ENST00000523328 PCYT1BQ9Y5K3 369 aaPredicted RBP22.58■■□□□ 1.21
PVT1-218ENST00000523328 SPTBN1Q01082 2364 aaKnown RBP22.57■■□□□ 1.2
PVT1-218ENST00000523328 NBPF19A0A087WUL8 3843 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 LRCH4O75427 683 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 STK17BO94768 372 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 DLGAP3O95886 979 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 PDHA1P08559 390 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 HHEXQ03014 270 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 CRTC2Q53ET0 693 aaPredicted RBP22.57■■□□□ 1.2
PVT1-218ENST00000523328 ARMC12Q5T9G4 340 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 ATP1A1-AS1Q5TC04 95 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 LRRC66Q68CR7 880 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 IRF2BP2Q7Z5L9 587 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 NLRP8Q86W28 1048 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 GALNT13Q8IUC8 556 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 FAM26EQ8N5C1 309 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 PSMG3-AS1Q96PY0 264 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 ERGIC2Q96RQ1 377 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 ZWILCHQ9H900 591 aa22.57■■□□□ 1.2
PVT1-218ENST00000523328 SARS2Q9NP81 518 aaKnown RBP22.57■■□□□ 1.2
PVT1-218ENST00000523328 TMCO5BA8MYB1 307 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 FZD6O60353 706 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 FERP16591 822 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 AMPD1P23109 780 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 MAN1A1P33908 653 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 PPM1FP49593 454 aaPredicted RBP22.56■■□□□ 1.2
PVT1-218ENST00000523328 PTSQ03393 145 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 LACTB2Q53H82 288 aaPredicted RBP22.56■■□□□ 1.2
PVT1-218ENST00000523328 ZNF765Q7L2R6 523 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 NCSTNQ92542 709 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 MIB2Q96AX9 1013 aa22.56■■□□□ 1.2
PVT1-218ENST00000523328 TRIT1Q9H3H1 467 aaKnown RBP22.56■■□□□ 1.2
PVT1-218ENST00000523328 LIMA1Q9UHB6 759 aaKnown RBP22.56■■□□□ 1.2
PVT1-218ENST00000523328 UTP20O75691 2785 aaKnown RBP22.55■■□□□ 1.2
PVT1-218ENST00000523328 ICE1Q9Y2F5 2266 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 PRR19A6NJB7 356 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 DNAJC6O75061 913 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 TCN2P20062 427 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 MMP13P45452 471 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 MC1RQ01726 317 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 UBXN1Q04323 297 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 NFATC2Q13469 925 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 DPYSL2Q16555 572 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 PPP1R2P3Q6NXS1 205 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 KDELC2Q7Z4H8 507 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 BBS5Q8N3I7 341 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 TBC1D29Q9UFV1 150 aa22.55■■□□□ 1.2
PVT1-218ENST00000523328 ZNF106Q9H2Y7 1883 aaKnown RBP22.55■■□□□ 1.2
PVT1-218ENST00000523328 H3BRJ5 948 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 PYGLP06737 847 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 CCDC172P0C7W6 258 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 ATP1A3P13637 1013 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 IL1R2P27930 398 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 STAT5AP42229 794 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 CD97P48960 835 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 MARC1Q5VT66 337 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 C16orf46Q6P387 395 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 IYDQ6PHW0 289 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 TMCO3Q6UWJ1 677 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 POLNQ7Z5Q5 900 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 EXD1Q8NHP7 514 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 SIDT1Q9NXL6 827 aaKnown RBP22.54■■□□□ 1.2
PVT1-218ENST00000523328 TP53TG5Q9Y2B4 290 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 PRKAB1Q9Y478 270 aa22.54■■□□□ 1.2
PVT1-218ENST00000523328 MRPS18BQ9Y676 258 aaKnown RBP22.54■■□□□ 1.2
PVT1-218ENST00000523328 A0A0J9YYE9 177 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 A6NCN8 305 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 POLR1CO15160 346 aaPredicted RBP22.53■■□□□ 1.2
PVT1-218ENST00000523328 INPP4BO15327 924 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 TRBC1P01850 177 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 ZNF30P17039 623 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 F8A1P23610 371 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 EPHA4P54764 986 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 KLRB1Q12918 225 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 SEPT6Q14141 434 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 MAP7Q14244 749 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 APTXQ7Z2E3 356 aaKnown RBP22.53■■□□□ 1.2
PVT1-218ENST00000523328 ATPAF2Q8N5M1 289 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms