RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ASRGL1Q7L266 308 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 TBC1D1Q86TI0 1168 aaPredicted RBP6.83□□□□□ -1.32
SPIDR-218ENST00000522222 PRPF39Q86UA1 669 aaKnown RBP6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ZSWIM9Q86XI8 627 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 MAP7D3Q8IWC1 876 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ARHGAP24Q8N264 748 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 PGBD5Q8N414 524 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 TMEM145Q8NBT3 493 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DEFB124Q8NES8 71 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 UHMK1Q8TAS1 419 aaKnown RBP6.83□□□□□ -1.32
SPIDR-218ENST00000522222 SLC35B2Q8TB61 432 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 MGARPQ8TDB4 240 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 PYROXD1Q8WU10 500 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 HAUS1Q96CS2 278 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ZNF599Q96NL3 588 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 LRRC37BQ96QE4 947 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 PSKH2Q96QS6 385 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 TUBGCP5Q96RT8 1024 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 CYTH2Q99418 400 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 MGME1Q9BQP7 344 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 HEMGNQ9BXL5 484 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 VPS11Q9H270 941 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ACSS3Q9H6R3 686 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 GAREM1Q9H706 876 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ABCF3Q9NUQ8 709 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DNAAF2Q9NVR5 837 aaKnown RBP6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DKK3Q9UBP4 350 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 SEPT3Q9UH03 358 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DNPEPQ9ULA0 475 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 PHTF1Q9UMS5 762 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DMTF1Q9Y222 760 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 R3HDM2Q9Y2K5 976 aaKnown RBP6.83□□□□□ -1.32
SPIDR-218ENST00000522222 SNX11Q9Y5W9 270 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 IKBKGQ9Y6K9 419 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 TMEM131Q92545 1883 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DNAH14Q0VDD8 3507 aa6.83□□□□□ -1.32
SPIDR-218ENST00000522222 DOCK9Q9BZ29 2069 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TTC24A2A3L6 582 aaPredicted RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 H0Y8X5 98 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 NEMP1O14524 444 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TRAFD1O14545 582 aaPredicted RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 GIPC1O14908 333 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 RAD51BO15315 384 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TGDSO95455 350 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PRKCGP05129 697 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CD59P13987 128 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TIMP2P16035 220 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PECAM1P16284 738 aaPredicted RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CR2P20023 1033 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 HNRNPA2B1P22626 353 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 KDELR1P24390 212 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CD38P28907 300 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 SERPINA4P29622 427 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 AKT2P31751 481 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 MMP12P39900 470 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 GARSP41250 739 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CSNK1DP48730 415 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 VPS41P49754 854 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CCT8P50990 548 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 NOVA1P51513 510 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CCNG1P51959 295 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 NXPH1P58417 271 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 RPS21P63220 83 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CDK18Q07002 472 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PDIA2Q13087 525 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 LRRC14Q15048 493 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TRIP13Q15645 432 aaPredicted RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 HLA-BQ31612 363 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 WASHC2DQ5SRD0 308 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 KIAA1161Q6NSJ0 714 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PSAPL1Q6NUJ1 521 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 NEK5Q6P3R8 708 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 ADGRD1Q6QNK2 874 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 IL27RAQ6UWB1 636 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 MFSD7Q6UXD7 560 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 GCNT7Q6ZNI0 430 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CAMK1DQ8IU85 385 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 ZBED8Q8IZ13 594 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PLD5Q8N7P1 536 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 GDAP1Q8TB36 358 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 RAB3IL1Q8TBN0 382 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 DENND1AQ8TEH3 1009 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 RAB7BQ96AH8 199 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 LRRC39Q96DD0 335 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 C9orf72Q96LT7 481 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 NSMCE3Q96MG7 304 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 RNF157Q96PX1 679 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 SIKE1Q9BRV8 207 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CPEB1Q9BZB8 566 aaKnown RBP6.82□□□□□ -1.32
SPIDR-218ENST00000522222 CXorf56Q9H5V9 222 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 ATP13A3Q9H7F0 1226 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 PCDH12Q9NPG4 1184 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 DTLQ9NZJ0 730 aa6.82□□□□□ -1.32
SPIDR-218ENST00000522222 LNPEPQ9UIQ6 1025 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms