RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 PISDQ9UG56 409 aa18.37■□□□□ 0.53
TOP1MT-216ENST00000522121 SHROOM3Q8TF72 1996 aa18.37■□□□□ 0.53
TOP1MT-216ENST00000522121 C1orf232A0A0U1RR37 186 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 KCNK1O00180 336 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 APOL1O14791 398 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 INPP4BO15327 924 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 MFAP3LO75121 409 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 ASMTLO95671 621 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 CPNE6O95741 557 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 HGFP14210 728 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 ZFXP17010 805 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 GPR3P46089 330 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 OR1D5P58170 312 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 IFI35P80217 286 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 AP1B1Q10567 949 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 LRP8Q14114 963 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 CLPPQ16740 277 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 TAF1BQ53T94 588 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 MARK2Q7KZI7 788 aaKnown RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 TRIM74Q86UV6 250 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 GALNT13Q8IUC8 556 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 PLD5Q8N7P1 536 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 CHP1Q99653 195 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 MLPHQ9BV36 600 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 WDR70Q9NW82 654 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 PKD2L2Q9NZM6 624 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 BPTFQ12830 3046 aa18.36■□□□□ 0.53
TOP1MT-216ENST00000522121 PTPRQQ9UMZ3 2332 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 ANKRD66B4E2M5 251 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 NVLO15381 856 aaKnown RBP18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 B4GAT1O43505 415 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 MTA2O94776 668 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 KRT1P04264 644 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 SLC1A1P43005 524 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 CLN3Q13286 438 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 NR1D2Q14995 579 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 PDK1Q15118 436 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 PYCR3Q53H96 274 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 LRRC38Q5VT99 294 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 SLC9A4Q6AI14 798 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 CCDC81Q6ZN84 652 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 SLITRK4Q8IW52 837 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 NAGSQ8N159 534 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 SNRNP27Q8WVK2 155 aaKnown RBP18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 COX14Q96I36 57 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 AGAP2Q99490 1192 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 FAM83DQ9H4H8 585 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 RDH14Q9HBH5 336 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 DDX56Q9NY93 547 aaKnown RBP18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 VPS18Q9P253 973 aa18.35■□□□□ 0.53
TOP1MT-216ENST00000522121 RGSL1A5PLK6 1076 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 C3orf70A6NLC5 250 aaPredicted RBP18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 PPP1R12AO14974 1030 aaPredicted RBP18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 PRB1P04280 392 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 MMP2P08253 660 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 SPINT3P49223 89 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 ZBTB17Q13105 803 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 QPCTQ16769 361 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 USP53Q70EK8 1073 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 RFX6Q8HWS3 928 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 CNTD1Q8N815 330 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 PATE1Q8WXA2 126 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 WBP1Q96G27 269 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 CCNL2Q96S94 520 aaPredicted RBP18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 SEMA6CQ9H3T2 930 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 ZNHIT2Q9UHR6 403 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 ACSL6Q9UKU0 697 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 INTUQ9ULD6 942 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 PLEKHM1Q9Y4G2 1056 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 ST14Q9Y5Y6 855 aa18.34■□□□□ 0.53
TOP1MT-216ENST00000522121 K7ENP7 123 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 AGRPO00253 132 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 ITIH1P19827 911 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 TMEM164Q5U3C3 297 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 INO80CQ6PI98 192 aaPredicted RBP18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 TMPRSS9Q7Z410 1059 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 NT5DC3Q86UY8 548 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 RHOT1Q8IXI2 618 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 RNF214Q8ND24 703 aa18.33■□□□□ 0.52
TOP1MT-216ENST00000522121 AKR1B15C9JRZ8 316 aaPredicted RBP18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 SPOPO43791 374 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 ATP1A1P05023 1023 aaKnown RBP18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 TNNT1P13805 278 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 CD1CP29017 333 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 MAPK10P53779 464 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 GALNT3Q14435 633 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 HENMT1Q5T8I9 393 aaKnown RBP18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 RNF25Q96BH1 459 aaPredicted RBP18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 AGAP3Q96P47 875 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 NUDT22Q9BRQ3 303 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 CEP41Q9BYV8 373 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 RMI1Q9H9A7 625 aa18.32■□□□□ 0.52
TOP1MT-216ENST00000522121 ZFYVE1Q9HBF4 777 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms