RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MCOLN2Q8IZK6 566 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 TMEM151AQ8N4L1 468 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 UBR7Q8N806 425 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 OR6C4Q8NGE1 309 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 FAM71BQ8TC56 605 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 FAM81BQ96LP2 452 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 NUP85Q9BW27 656 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 SLC17A9Q9BYT1 436 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 APMAPQ9HDC9 416 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 TMEM9Q9P0T7 183 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 VPS18Q9P253 973 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 LRIT1Q9P2V4 623 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CNOT8Q9UFF9 292 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 NFU1Q9UMS0 254 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 CNTN6Q9UQ52 1028 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
CTNNA1-227ENST00000521387 TLN2Q9Y4G6 2542 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CNTRLQ7Z7A1 2325 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 A6NCN8 305 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 DPM1O60762 260 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 LRCH4O75427 683 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 PCDH8O95206 1070 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 SIX3O95343 332 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 FGGP02679 453 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CYP1A1P04798 512 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 STSP08842 583 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CTNNA2P26232 953 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CD1CP29017 333 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 DLSTP36957 453 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 MMP16P51512 607 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 THOP1P52888 689 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 BPIFB4P59827 614 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 NCOA4Q13772 614 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 HLTFQ14527 1009 aaKnown RBP eCLIP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 AMZ1Q400G9 498 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 FAM133BQ5BKY9 247 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 VWA2Q5GFL6 755 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 DCAF10Q5QP82 559 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 FAXCQ5TGI0 409 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 FAM46CQ5VWP2 391 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 EMBQ6PCB8 327 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CLEC20AQ6ZU45 233 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 ZNF771Q7L3S4 317 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 RD3Q7Z3Z2 195 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 ZNF677Q86XU0 584 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 MFN1Q8IWA4 741 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CCDC117Q8IWD4 279 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 NRSN1Q8IZ57 195 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 IQCKQ8N0W5 287 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 AGBL5Q8NDL9 886 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 SLC2A14Q8TDB8 520 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 UBE2Q2Q8WVN8 375 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 NRGNQ92686 78 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 PLD4Q96BZ4 506 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CYFIP2Q96F07 1278 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 FOXC2Q99958 501 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 ZSWIM1Q9BR11 485 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 NUDT9Q9BW91 350 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 SDCBP2Q9H190 292 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 CARD9Q9H257 536 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 UVRAGQ9P2Y5 699 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 ZNF451Q9Y4E5 1061 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 NOTCH1P46531 2555 aa7.32□□□□□ -1.24
CTNNA1-227ENST00000521387 MIF4GDA9UHW6 222 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 MCF2LO15068 1137 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TTI1O43156 1089 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TGP01266 2768 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TMEM191BP0C7N4 346 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 THRAP10827 490 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 RALAP11233 206 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ZNF28P17035 718 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ECHS1P30084 290 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 DNAJA1P31689 397 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 CSF2RBP32927 897 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PTGIRP43119 386 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 NDST1P52848 882 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 AP3M2P53677 418 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 MYL6P60660 151 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 RPS24P62847 133 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PPP2R2AP63151 447 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 NOMO3P69849 1222 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 MC2RQ01718 297 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 PTP4A2Q12974 167 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 CDSNQ15517 529 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 C2CD6Q53TS8 623 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ALS2CLQ60I27 953 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 NADSYN1Q6IA69 706 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TMEM270Q6UE05 265 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 TADA2BQ86TJ2 420 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 ACOT1Q86TX2 421 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 BIVMQ86UB2 503 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 KCNMB4Q86W47 210 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 WDR49Q8IV35 697 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 FSTL5Q8N475 847 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 MREGQ8N565 214 aa7.31□□□□□ -1.24
CTNNA1-227ENST00000521387 UBL4BQ8N7F7 174 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms