RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DCAF7P61962 342 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 SETQ01105 290 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 NIPAL4Q0D2K0 466 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 EIF4A2Q14240 407 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 ERV3-1Q14264 604 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 FRG1Q14331 258 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 ALG11Q2TAA5 492 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 AMZ1Q400G9 498 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 MMEL1Q495T6 779 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 GGNBP1Q5YKI7 109 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 FAM122CQ6P4D5 195 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 NCEH1Q6PIU2 408 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 FBXO46Q6PJ61 603 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 PXKQ7Z7A4 578 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 TBC1D1Q86TI0 1168 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZSCAN30Q86W11 494 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 SPATA2LQ8IUW3 424 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 FRMD1Q8N878 549 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 NEXN-AS1Q8NBZ9 246 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 KCNG4Q8TDN1 519 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 POMGNT1Q8WZA1 660 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARHGEF2Q92974 986 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 TMEM47Q9BQJ4 181 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 TKTL2Q9H0I9 626 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 HIPK2Q9H2X6 1198 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 ESRP2Q9H6T0 727 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 C17orf75Q9HAS0 396 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 GPR108Q9NPR9 543 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 HINT3Q9NQE9 182 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 KRT84Q9NSB2 600 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 SLCO3A1Q9UIG8 710 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 RCOR1Q9UKL0 485 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 KNSTRNQ9Y448 316 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 LYVE1Q9Y5Y7 322 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 PIAS3Q9Y6X2 628 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 SPAG9O60271 1321 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 RPGRIP1LQ68CZ1 1315 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 CACNA1IQ9P0X4 2223 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 DISP3Q9P2K9 1392 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 PIK3C2GO75747 1445 aa3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 SCAF11Q99590 1463 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 EIF2AK4Q9P2K8 1649 aaKnown RBP3.33□□□□□ -1.88
HMGB1P41-201ENST00000520234 CFAP65Q6ZU64 1925 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 LINC01553A4QN01 128 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 GOLGA6L9A6NEM1 432 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 LIPT2A6NK58 231 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 IFNL4K9M1U5 179 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SCAMP1O15126 338 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SLC25A12O75746 678 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 LETM1O95202 739 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 EIF2S1P05198 315 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 HSP90AB1P08238 724 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 IGHV4-30-4P0DP06 118 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ACADMP11310 421 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 FCGR1AP12314 374 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 CAPN3P20807 821 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 RRM1P23921 792 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 PBX3P40426 434 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 NAP1L1P55209 391 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARF3P61204 181 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 PRAMEP78395 509 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARF1P84077 181 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZBED6P86452 979 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZXDBP98169 803 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 EFNB3Q15768 340 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 C2orf68Q2NKX9 166 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 COL28A1Q2UY09 1125 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 HYIQ5T013 277 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 C20orf194Q5TEA3 1177 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 FAM69BQ5VUD6 431 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 CCDC30Q5VVM6 783 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SNX30Q5VWJ9 437 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SIGIRRQ6IA17 410 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ANKRD54Q6NXT1 300 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SARM1Q6SZW1 724 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 CYP20A1Q6UW02 462 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 QSOX2Q6ZRP7 698 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 HAPLN4Q86UW8 402 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARHGAP12Q8IWW6 846 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 DSELQ8IZU8 1212 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SPATA6LQ8N4H0 392 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 AFAP1Q8N556 730 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 PDILTQ8N807 584 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 WFIKKN2Q8TEU8 576 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 NEUROG1Q92886 237 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 MTBPQ96DY7 904 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 MMABQ96EY8 250 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 TREX2Q9BQ50 279 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 KXD1Q9BQD3 176 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 TM6SF1Q9BZW5 370 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 NDST4Q9H3R1 872 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 SCPEP1Q9HB40 452 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 CD93Q9NPY3 652 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 CNGB3Q9NQW8 809 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZHX1Q9UKY1 873 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 NOL7Q9UMY1 257 aaKnown RBP3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 TRAPPC8Q9Y2L5 1435 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 NRXN1Q9ULB1 1477 aa3.32□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARHGAP5Q13017 1502 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms