RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 SNX19Q92543 992 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 ZC3H10Q96K80 434 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 SPATA16Q9BXB7 569 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 LRRC4CQ9HCJ2 640 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 NINJ2Q9NZG7 142 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 FNDC3AQ9Y2H6 1198 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.43
SDC2-205ENST00000520233 SLC30A1Q9Y6M5 507 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 SCN8AQ9UQD0 1980 aa17.71■□□□□ 0.43
SDC2-205ENST00000520233 NUMA1Q14980 2115 aa17.71■□□□□ 0.42
SDC2-205ENST00000520233 RAD51BO15315 384 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 SPAG6O75602 509 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 RHOBTB1O94844 696 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 GOT2P00505 430 aaKnown RBP17.7■□□□□ 0.42
SDC2-205ENST00000520233 PCCBP05166 539 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 SSTR1P30872 391 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 GPR1P46091 355 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 PMS2P54278 862 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 GPX6P59796 221 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 ITGA9Q13797 1035 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 MAP9Q49MG5 647 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 RAET1GQ6H3X3 334 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 C3orf62Q6ZUJ4 267 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 CYS1Q717R9 158 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 CEP68Q76N32 757 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 TRMT10CQ7L0Y3 403 aaKnown RBP17.7■□□□□ 0.42
SDC2-205ENST00000520233 SNX20Q7Z614 316 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 OR4L1Q8NH43 312 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 ZNF398Q8TD17 642 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 DNASE2BQ8WZ79 361 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 AGAP2Q99490 1192 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 ORAI3Q9BRQ5 295 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 SEMA4AQ9H3S1 761 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 FZD3Q9NPG1 666 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 C20orf96Q9NUD7 363 aaPredicted RBP17.7■□□□□ 0.42
SDC2-205ENST00000520233 HS3ST3A1Q9Y663 406 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 LRRK1Q38SD2 2015 aa17.7■□□□□ 0.42
SDC2-205ENST00000520233 OR51F1A6NGY5 319 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 AGAP14A8MT82 685 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 FPGTO14772 594 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 PRAMEF1O95521 474 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 SOD1P00441 154 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 ITGALP20701 1170 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 FOXN2P32314 431 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 IGFALSP35858 605 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 CACNG1Q06432 222 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 NFATC2Q13469 925 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 BRD3Q15059 726 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 GPR33Q49SQ1 333 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 ATP13A5Q4VNC0 1218 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 ZRANB3Q5FWF4 1079 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 WDR45BQ5MNZ6 344 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 CAPN12Q6ZSI9 719 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
SDC2-205ENST00000520233 KCNMB4Q86W47 210 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 LMNTD2Q8IXW0 634 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 PELI3Q8N2H9 469 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 TMEM145Q8NBT3 493 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 PLA2G15Q8NCC3 412 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 CAVIN3Q969G5 261 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 CERS2Q96G23 380 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 SERAC1Q96JX3 654 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 VPS35Q96QK1 796 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 ASB8Q9H765 288 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 VPS37BQ9H9H4 285 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 MOCS1Q9NZB8 636 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 EIF2B4Q9UI10 523 aaKnown RBP17.69■□□□□ 0.42
SDC2-205ENST00000520233 ZDBF2Q9HCK1 2354 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
SDC2-205ENST00000520233 TRBV5-4A0A0C4DH59 114 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 FADS2P1A8MWK0 482 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 K7ESM1 405 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A9O60656 530 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 PLXNA2O75051 1894 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A6P19224 532 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A1P22309 533 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A4P22310 534 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 PHBP35232 272 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A3P35503 534 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A5P35504 534 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 TRIM23P36406 574 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 PTGER3P43115 390 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 THOC5Q13769 683 aaKnown RBP17.68■□□□□ 0.42
SDC2-205ENST00000520233 SIM2Q14190 667 aaPredicted RBP17.68■□□□□ 0.42
SDC2-205ENST00000520233 INPP5AQ14642 412 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 FASTKD1Q53R41 847 aaKnown RBP17.68■□□□□ 0.42
SDC2-205ENST00000520233 LYSMD4Q5XG99 296 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 ADAMTSL4Q6UY14 1074 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 MICALCLQ6ZW33 695 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UNC5BQ8IZJ1 945 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 GPR150Q8NGU9 434 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 FAM174AQ8TBP5 190 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 ULK4Q96C45 1275 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 MYOCQ99972 504 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 ZNF106Q9H2Y7 1883 aaKnown RBP17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A7Q9HAW7 530 aa17.68■□□□□ 0.42
SDC2-205ENST00000520233 UGT1A10Q9HAW8 530 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms