RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 ECEL1O95672 775 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 CPNE6O95741 557 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 AK4P27144 223 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-220ENST00000519767 IFI35P80217 286 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-220ENST00000519767 LRP8Q14114 963 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 NR1D2Q14995 579 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 DOK6Q6PKX4 331 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 LPCAT1Q8NF37 534 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 CCHCR1Q8TD31 782 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-220ENST00000519767 SMIM14Q96QK8 99 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 OR2M4Q96R27 311 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 MLPHQ9BV36 600 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-220ENST00000519767 LOXL2Q9Y4K0 774 aa25.19■■□□□ 1.62
VEGFA-220ENST00000519767 HELZ2Q9BYK8 2649 aaKnown RBP25.19■■□□□ 1.62
VEGFA-220ENST00000519767 KIF26BQ2KJY2 2108 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 ATMQ13315 3056 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 ANKRD66B4E2M5 251 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 ALDH4A1P30038 563 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 SLC1A1P43005 524 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 MAZP56270 477 aaKnown RBP25.18■■□□□ 1.62
VEGFA-220ENST00000519767 PDK1Q15118 436 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 PYCR3Q53H96 274 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 ODF2Q5BJF6 829 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 SLC9A4Q6AI14 798 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 JAMLQ86YT9 394 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 SLITRK4Q8IW52 837 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 PLD5Q8N7P1 536 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 PTCD2Q8WV60 388 aaKnown RBP25.18■■□□□ 1.62
VEGFA-220ENST00000519767 COX14Q96I36 57 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 CHP1Q99653 195 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 BRD8Q9H0E9 1235 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 HEY1Q9Y5J3 304 aa25.18■■□□□ 1.62
VEGFA-220ENST00000519767 KCNK1O00180 336 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 ACTR1BP42025 376 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 CD86P42081 329 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 OR1D5P58170 312 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 ACTR1AP61163 376 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 CLN3Q13286 438 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 SQSTM1Q13501 440 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 CCDC81Q6ZN84 652 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 GALNT13Q8IUC8 556 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 NAGSQ8N159 534 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 LRRN4Q8WUT4 740 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 AGAP2Q99490 1192 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 B3GNT4Q9C0J1 378 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 TSPY26PQ9H489 355 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 FAM83DQ9H4H8 585 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 VPS18Q9P253 973 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 PISDQ9UG56 409 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 INTUQ9ULD6 942 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 ST14Q9Y5Y6 855 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 AHCTF1Q8WYP5 2266 aa25.17■■□□□ 1.62
VEGFA-220ENST00000519767 ARHGEF17Q96PE2 2063 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-220ENST00000519767 C1orf232A0A0U1RR37 186 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 C3orf70A6NLC5 250 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-220ENST00000519767 K7ENP7 123 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 APOL1O14791 398 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 MMP2P08253 660 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 HGFP14210 728 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 SPINT3P49223 89 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 TCEAL1Q15170 157 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 QPCTQ16769 361 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 AMZ1Q400G9 498 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 MAP9Q49MG5 647 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 PHF19Q5T6S3 580 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 INO80CQ6PI98 192 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-220ENST00000519767 CNTD1Q8N815 330 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 CCNL2Q96S94 520 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-220ENST00000519767 DPYSL5Q9BPU6 564 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 RMI1Q9H9A7 625 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 DDX56Q9NY93 547 aaKnown RBP25.16■■□□□ 1.62
VEGFA-220ENST00000519767 PKD2L2Q9NZM6 624 aa25.16■■□□□ 1.62
VEGFA-220ENST00000519767 MFAP3LO75121 409 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 ASMTLO95671 621 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 CD1CP29017 333 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 AP1B1Q10567 949 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 TAF1BQ53T94 588 aaPredicted RBP25.15■■□□□ 1.62
VEGFA-220ENST00000519767 USP53Q70EK8 1073 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 CNGA4Q8IV77 575 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 RHOT1Q8IXI2 618 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 SEMA6CQ9H3T2 930 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 SPTLC3Q9NUV7 552 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 ZNHIT2Q9UHR6 403 aa25.15■■□□□ 1.62
VEGFA-220ENST00000519767 HGSO14964 777 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-220ENST00000519767 PPP1R12AO14974 1030 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-220ENST00000519767 INPP4BO15327 924 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 TMEM164Q5U3C3 297 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 MARK2Q7KZI7 788 aaKnown RBP25.14■■□□□ 1.62
VEGFA-220ENST00000519767 BZW1Q7L1Q6 419 aaKnown RBP25.14■■□□□ 1.62
VEGFA-220ENST00000519767 TMPRSS9Q7Z410 1059 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 TRIM74Q86UV6 250 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 RDH14Q9HBH5 336 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 RAD18Q9NS91 495 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 CNOT6Q9ULM6 557 aaKnown RBP25.14■■□□□ 1.62
VEGFA-220ENST00000519767 PLEKHM1Q9Y4G2 1056 aa25.14■■□□□ 1.62
VEGFA-220ENST00000519767 PPM1DO15297 605 aa25.13■■□□□ 1.61
VEGFA-220ENST00000519767 ZBTB17Q13105 803 aa25.13■■□□□ 1.61
VEGFA-220ENST00000519767 TRA2AQ13595 282 aaKnown RBP eCLIP25.13■■□□□ 1.611e-8■■□□□ 12.8
VEGFA-220ENST00000519767 HENMT1Q5T8I9 393 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms